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dope_loopmodel() -- prepare to build models with DOPE loop refinement

dope_loopmodel(env, sequence, alnfile=None, knowns=None, inimodel=None, deviation=None, library_schedule=None, toplib=None, parlib=None, topology_model=None, csrfile=None, inifile=None, assess_methods=None, loop_assess_methods=None, initial_model=None)
If initial_model is set, then it is taken to be a PDB file containing the initial structure used to build each loop (if not set, then the initial loop is constructed by 3D interpolation, exactly as for regular loop modeling).

See loopmodel() for all other arguments.



Ben Webb 2007-01-19