Patches/9v5: Difference between revisions
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Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix | Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix <code>patch</code> command, or apply them by hand.) | ||
💡 The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems. | |||
* [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use | * [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use <code>regedit</code> to copy the <code>HKLM\Software\Python\PythonCore\2.5\PythonPath\Modeller9v5</code> key to <code>HKLM\Software\Python\PythonCore\2.6\PythonPath\Modeller9v5</code>. If using the Linux RPM, symlink <code>/usr/lib/modeller9v5/modlib/modeller</code> and <code>/usr/lib/python2.5/site-packages/_modeller.so</code> into <code>/usr/lib/python2.6/site-packages/</code>.) | ||
* [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology. | * [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology. | ||
* [http://salilab.org/modeller/archive/patch-9v5/GDP_NAD.patch GDP_NAD.patch]: add some bonds that were missing from the GDP and NAD topologies. | * [http://salilab.org/modeller/archive/patch-9v5/GDP_NAD.patch GDP_NAD.patch]: add some bonds that were missing from the GDP and NAD topologies. | ||
[[Category:Patches]] | |||
Revision as of 20:59, 16 August 2022
Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix patch command, or apply them by hand.)
💡 The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.
- python2.6.patch: support for Python 2.6. (For full support on Windows, use
regeditto copy theHKLM\Software\Python\PythonCore\2.5\PythonPath\Modeller9v5key toHKLM\Software\Python\PythonCore\2.6\PythonPath\Modeller9v5. If using the Linux RPM, symlink/usr/lib/modeller9v5/modlib/modellerand/usr/lib/python2.5/site-packages/_modeller.sointo/usr/lib/python2.6/site-packages/.) - dade-bonds.patch: add some bonds that were missing from the DADE (ADE DNA base) topology.
- GDP_NAD.patch: add some bonds that were missing from the GDP and NAD topologies.