(Add support for Python 2.6.)
(Add DADE bonds patch.)
Line 7: Line 7:


* [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\[[PythonCore]]\2.5\[[PythonPath]]\Modeller9v5` key to `HKLM\Software\Python\[[PythonCore]]\2.6\[[PythonPath]]\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.)
* [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\[[PythonCore]]\2.5\[[PythonPath]]\Modeller9v5` key to `HKLM\Software\Python\[[PythonCore]]\2.6\[[PythonPath]]\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.)
* [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology.


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Patches for old versions: [[/9v4]] [[/9v3]] [[/9v2]] [[/9v1]] [[/8v2]] [[/8v1]]
Patches for old versions: [[/9v4]] [[/9v3]] [[/9v2]] [[/9v1]] [[/8v2]] [[/8v1]]



Revision as of 03:28, 25 November 2008


Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix `patch` command, or apply them by hand.)

(!) The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.

  • python2.6.patch: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\PythonCore\2.5\PythonPath\Modeller9v5` key to `HKLM\Software\Python\PythonCore\2.6\PythonPath\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.)
  • dade-bonds.patch: add some bonds that were missing from the DADE (ADE DNA base) topology.

Patches for old versions: /9v4 /9v3 /9v2 /9v1 /8v2 /8v1