Patches/8v1: Difference between revisions

Revision as of 20:50, 16 August 2022

Patches on this page can be applied to Modeller 8v1 to fix some minor problems. (Use the Unix patch command, or apply them by hand.)

These patches are also incorporated into Modeller 8v2, which you should use in preference to applying these patches manually.

💡 The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.

redefine-variables.patch: make the DEFINE_* TOP commands work in the same way as in Modeller 7v7, when trying to redefine an existing variable.
circular-ref.patch: fix for out of memory problems when looping over many models, due to Python circular references.

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 <!-- #acl [[Modeller Caretaker]]:read,write,revert All:read -->
-Patches on this page can be applied to Modeller 8v1 to fix some minor problems. (Use the Unix `patch` command, or apply them by hand.)
+Patches on this page can be applied to Modeller 8v1 to fix some minor problems. (Use the Unix <code>patch</code> command, or apply them by hand.)
 These patches are also incorporated into Modeller 8v2, which you should use in preference to applying these patches manually.
-(!) The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.
+💡 The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.
 * [http://salilab.org/modeller/archive/patch-8v1/redefine-variables.patch redefine-variables.patch]: make the DEFINE_* TOP commands work in the same way as in Modeller 7v7, when trying to redefine an existing variable.
 * [http://salilab.org/modeller/archive/patch-8v1/circular-ref.patch circular-ref.patch]: fix for out of memory problems when looping over many models, due to Python circular references.