Patches: Difference between revisions
(Add DADE bonds patch.) |
(Add GDP/NAD bonds patch.) |
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* [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\[[PythonCore]]\2.5\[[PythonPath]]\Modeller9v5` key to `HKLM\Software\Python\[[PythonCore]]\2.6\[[PythonPath]]\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.) | * [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\[[PythonCore]]\2.5\[[PythonPath]]\Modeller9v5` key to `HKLM\Software\Python\[[PythonCore]]\2.6\[[PythonPath]]\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.) | ||
* [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology. | * [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology. | ||
* [http://salilab.org/modeller/archive/patch-9v5/GDP_NAD.patch GDP_NAD.patch]: add some bonds that were missing from the GDP and NAD topologies. | |||
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Patches for old versions: [[/9v4]] [[/9v3]] [[/9v2]] [[/9v1]] [[/8v2]] [[/8v1]] | Patches for old versions: [[/9v4]] [[/9v3]] [[/9v2]] [[/9v1]] [[/8v2]] [[/8v1]] | ||
Revision as of 07:18, 4 December 2008
Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix `patch` command, or apply them by hand.)
(!) The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.
- python2.6.patch: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\PythonCore\2.5\PythonPath\Modeller9v5` key to `HKLM\Software\Python\PythonCore\2.6\PythonPath\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.)
- dade-bonds.patch: add some bonds that were missing from the DADE (ADE DNA base) topology.
- GDP_NAD.patch: add some bonds that were missing from the GDP and NAD topologies.