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Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix `patch` command, or apply them by hand.)
Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix <code>patch</code> command, or apply them by hand.)


(!) The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.
💡 The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.


* [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use `regedit` to copy the `HKLM\Software\Python\[[PythonCore]]\2.5\[[PythonPath]]\Modeller9v5` key to `HKLM\Software\Python\[[PythonCore]]\2.6\[[PythonPath]]\Modeller9v5`. If using the Linux RPM, symlink `/usr/lib/modeller9v5/modlib/modeller` and `/usr/lib/python2.5/site-packages/_modeller.so` into `/usr/lib/python2.6/site-packages/`.)
* [http://salilab.org/modeller/archive/patch-9v5/python2.6.patch python2.6.patch]: support for Python 2.6. (For full support on Windows, use <code>regedit</code> to copy the <code>HKLM\Software\Python\PythonCore\2.5\PythonPath\Modeller9v5</code> key to <code>HKLM\Software\Python\PythonCore\2.6\PythonPath\Modeller9v5</code>. If using the Linux RPM, symlink <code>/usr/lib/modeller9v5/modlib/modeller</code> and <code>/usr/lib/python2.5/site-packages/_modeller.so</code> into <code>/usr/lib/python2.6/site-packages/</code>.)
* [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology.
* [http://salilab.org/modeller/archive/patch-9v5/dade-bonds.patch dade-bonds.patch]: add some bonds that were missing from the DADE (ADE DNA base) topology.
* [http://salilab.org/modeller/archive/patch-9v5/GDP_NAD.patch GDP_NAD.patch]: add some bonds that were missing from the GDP and NAD topologies.
* [http://salilab.org/modeller/archive/patch-9v5/GDP_NAD.patch GDP_NAD.patch]: add some bonds that were missing from the GDP and NAD topologies.


[[Category:Patches]]

Latest revision as of 22:13, 16 August 2022


Patches on this page can be applied to Modeller 9v5 to fix some minor problems. (Use the Unix patch command, or apply them by hand.)

💡 The patches are listed in chronological order (oldest first), so you should apply them in this order to avoid problems.

  • python2.6.patch: support for Python 2.6. (For full support on Windows, use regedit to copy the HKLM\Software\Python\PythonCore\2.5\PythonPath\Modeller9v5 key to HKLM\Software\Python\PythonCore\2.6\PythonPath\Modeller9v5. If using the Linux RPM, symlink /usr/lib/modeller9v5/modlib/modeller and /usr/lib/python2.5/site-packages/_modeller.so into /usr/lib/python2.6/site-packages/.)
  • dade-bonds.patch: add some bonds that were missing from the DADE (ADE DNA base) topology.
  • GDP_NAD.patch: add some bonds that were missing from the GDP and NAD topologies.