[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [ModPipe-users] Modpipe problem

On 3/8/16 5:42 PM, jb ZHOU wrote:

Dear ModPipe community:
I installed modpipe in our system,but when I run the example of
modpipe,I get the following error,I don't know how to deal with it:

$ ../main/ModPipe.pl --conf_file modpipe.conf --sequence_id
97e075794f588a59e8a0fb8a945814b1MLGIKIKP
MPLib::MPModules::GetProfile__E> Sequence file not found:
pwd/data/97e/97e075794f588a59e8a0fb8a945814b1MLGIKIKP/sequence/97e075794f588a59e8a0fb8a945814b1MLGIKIKP.fsa
I'm pretty sure you shouldn't have a literal "pwd" here. Are you sure you didn't mean `pwd` (with backticks)? That's what is suggested in the documentation: http://salilab.org/modpipe/doc/running.html#examples 

	Ben
--
                      https://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
	- Sir Arthur Conan Doyle