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Re: [ModPipe-users] [modeller_usage] Fwd: Installation Issues



Yes, ./lib/python/modpipe/version.py exists:

> more ./lib/python/modpipe/version.py

******************************************************************************
# This file is part of ModPipe, Copyright 1997-2010 Andrej Sali
#
# ModPipe is free software: you can redistribute it and/or modify
# it under the terms of version 2 of the GNU General Public License
# as published by the Free Software Foundation.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with ModPipe.  If not, see <http://www.gnu.org/licenses/>.

def get():
    return "2.2.0"

def message():
    return "%prog, part of ModPipe version " + get() + """
Copyright 1997-2010 Andrej Sali
License GPLv2: GNU GPL version 2 <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law."""
******************************************************************************

But, may be this would help: When I run a test, I get these errors:

> ./tests/make

======================================================================
ERROR: test_ce (test_ce.CETests)
Check CE
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/alpha/share/software/bioinf/MODPIPE/modpipe220/tests/unit/test_ce.py", line 12, in test_ce
    ce = modpipe.binaries.get_ce()
  File "/alpha/share/software/bioinf/MODPIPE/modpipe220/lib/python/modpipe/binaries.py", line 45, in get_ce
    raise modpipe.MissingBinaryError('ModPipe was not configured with CE')
MissingBinaryError: ModPipe was not configured with CE

======================================================================
FAIL: test_make_one_file (test_make_chains.MakeChainsTests)
Check production of one aggregated chains file
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/alpha/share/software/bioinf/MODPIPE/modpipe220/tests/unit/test_make_chains.py", line 52, in test_make_one_file
    self.assert_(filecmp.cmp(out, '../db/test-pdb.pir'))
AssertionError: False is not True

----------------------------------------------------------------------
Ran 51 tests in 6.151s

FAILED (failures=1, errors=8)
make: *** [unit] Error 1
----------------------------------------------------------------------


Thanks for your help!







On Fri, Oct 18, 2013 at 5:38 PM, Ben Webb <" target="_blank">> wrote:
On 10/18/2013 02:28 PM, Amjad Farooq wrote:
ImportError: No module named modpipe.version

This file should also be generated by Setup, so it suggests that Setup didn't run properly. Does $MODPIPE/lib/python/modpipe/version.py exist?

        Ben
--
" target="_blank">                      http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
        - Sir Arthur Conan Doyle
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