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Re: [ModPipe-users] [modeller_usage] Fwd: Installation Issues

On 10/18/13 2:58 PM, Amjad Farooq wrote:

Yes, ./lib/python/modpipe/version.py exists:
OK then, that means that for some reason your Python path is not being set properly. How *exactly* are you running the demo? If you look at main/AddSeqMP.py, you should see that it adds that lib/python subdirectory to the Python path. So either you're running a different AddSeqMP.py script, or it's not adding the path correctly for some reason. 


But, may be this would help: When I run a test, I get these errors:

...

MissingBinaryError: ModPipe was not configured with CE


This one is surely self explanatory.


"/alpha/share/software/bioinf/MODPIPE/modpipe220/tests/unit/test_make_chains.py",
line 52, in test_make_one_file
     self.assert_(filecmp.cmp(out, '../db/test-pdb.pir'))
AssertionError: False is not True
You'd have to look at the file it produces (out I think is pdb-list.pir) and see what the difference is. 

	Ben
--
                      http://salilab.org/~ben/
"It is a capital mistake to theorize before one has data."
	- Sir Arthur Conan Doyle