Re: [modeller_usage] core dumped when reading my restraint file
To: daniele bemporad <>
Subject: Re: [modeller_usage] core dumped when reading my restraint file
From: Modeller Caretaker <>
Date: Wed, 21 Jul 2004 18:08:03 -0700
Cc:
On Wed, Jul 21, 2004 at 01:40:39AM -0700, daniele bemporad wrote:
> Many thanks for your reply. My restraint file looks
> like:
> MODELLER5 VERSION: MODELLER FORMAT
> R 3 1 1 27 2 2 0 3077 3088
> 6.5977 0.1000
> R 3 1 1 27 2 2 0 3077 3089
> 7.7258 0.1000
> R 3 1 1 27 2 2 0 3077 3093
> 8.8338 0.1000
I'm assuming your mail client has wrapped those lines - each 'R' line
should be a single line, not two.
> Just to be clear: I have made sure that my distance restraints
> don't collide with the homology-derived ones.
That shouldn't be an issue - at least, such an overlap shouldn't make
Modeller crash - at worst, you'll get a poorly optimized solution.
Please send all of the necessary inputs to me at
, and I'll take a look. It is extremely hard to
diagnose your problem unless I can reproduce it in the lab.
Ben Webb, Modeller Caretaker
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