Modeller_Usage Mailing List (by date)

• Thread Index

• Re: [modeller_usage] help! 2004/01/05
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Fwd: FW: Modeller 2004/01/05
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] loop modelling 2004/01/08
  • From: nurul bahiyah <bahiyahn AT tm.net.my>
• [modeller_usage] set restraints violations directory 2004/01/09
  • From: Antoine Leimgruber <antoine.leimgruber AT etu.unil.ch>
• Re: [modeller_usage] set restraints violations directory 2004/01/09
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] structure not read in 2004/01/10
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• Re: [modeller_usage] structure not read in 2004/01/12
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] structure not read in 2004/01/12
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• Re: [modeller_usage] structure not read in 2004/01/13
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] a new hurdle-plz correct 2004/01/14
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• [modeller_usage] confused 2004/01/14
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• [modeller_usage] kindly suggest 2004/01/15
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• [modeller_usage] 2004/01/15
  • From: nick jones <bloodbrother778 AT yahoo.com>
• [modeller_usage] Can MODELLER use temperature B-factors? 2004/01/16
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] windows problem? 2004/01/16
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• [modeller_usage] Hetatm-entries in calculated model 2004/01/17
  • From: "Volker Aufschild" <volker AT aufschild.de>
• [modeller_usage] The number of the models 2004/01/17
  • From: BinBin Liu <bmbbl AT bms.leeds.ac.uk>
• [modeller_usage] Inserting Cl atoms 2004/01/18
  • From: rleite AT ualg.pt
• Re: [modeller_usage] The number of the models 2004/01/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Hetatm-entries in calculated model 2004/01/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: the number of the models 2004/01/19
  • From: BinBin Liu <bmbbl AT bms.leeds.ac.uk>
• [modeller_usage] Simple and Multiple Alignment 2004/01/19
  • From: Hugo Brandão Uchôa <brandaouchoa AT yahoo.com.br>
• Re: [modeller_usage] The number of the models 2004/01/19
  • From: "Thomas Duncan" <DuncanT AT upstate.edu>
• [modeller_usage] Ligand parameters 2004/01/19
  • From: "Thomas Duncan" <DuncanT AT upstate.edu>
• [modeller_usage] when does MODELLER hang 2004/01/20
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• Re: [modeller_usage] when does MODELLER hang 2004/01/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Re: the number of the models 2004/01/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] The number of the models 2004/01/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Ligand parameters 2004/01/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] 2004/01/20
  • From: JIAN YIN <yinja AT uc.edu>
• [modeller_usage] Re: when does MODELLER hang 2004/01/21
  • From: Antoine Leimgruber <antoine.leimgruber AT etu.unil.ch>
• Re: [modeller_usage] Re: when does MODELLER hang 2004/01/21
  • From: N.J.Lindsey AT Bradford.ac.uk
• Re: [modeller_usage] Re: when does MODELLER hang 2004/01/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Re: when does MODELLER hang 2004/01/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] 2004/01/22
  • From: Michael Grabe <mgrabe AT itsa.ucsf.edu>
• [modeller_usage] Multiple template usage 2004/01/26
  • From: Dinesh Soares <dinesh AT ambler.icmb.ed.ac.uk>
• [modeller_usage] Help wanted!!! 2004/01/27
  • From: "Chupakhin - Чупахин" <vlchupakhin AT yandex.ru>
• Re: [modeller_usage] Help wanted!!! 2004/01/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Req. for Idea 2004/01/27
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] Loop refinment 2004/01/28
  • From: "Chupakhin - Чупахин" <vlchupakhin AT yandex.ru>
• [modeller_usage] 2004/01/28
  • From: "SLN Prasad Reddy" <sreeyapu AT rediffmail.com>
• [modeller_usage] Installing Modeller on Redhat linux 9 2004/01/30
  • From: "Patil, Sachin" <spatil3 AT UTNet.UToledo.Edu>
• [modeller_usage] 2004/01/30
  • From: "SLN Prasad Reddy" <sreeyapu AT rediffmail.com>
• Re: [modeller_usage] Installing Modeller on Redhat linux 9 2004/01/30
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] RE: 2004/01/31
  • From: "Eswar Narayanan" <eashwar AT salilab.org>
• [modeller_usage] comparative modeling of protein 2004/02/01
  • From: "Spero Manolatos" <sperom AT verizon.net>
• Re: [modeller_usage] comparative modeling of protein 2004/02/02
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] big_sequence 2004/02/02
  • From: "Chupakhin - Чупахин" <vlchupakhin AT yandex.ru>
• Re: [modeller_usage] big_sequence 2004/02/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] begginer 2004/02/03
  • From: "Chupakhin - Чупахин" <vlchupakhin AT yandex.ru>
• [modeller_usage] RE: RE: 2004/02/05
  • From: "Eswar Narayanan" <eashwar AT salilab.org>
• [modeller_usage] Modeller cant find .seq file 2004/02/06
  • From: Esben Jannik Bjerrum <esbenjannik AT rocketmail.com>
• RE: [modeller_usage] Modeller cant find .seq file 2004/02/09
  • From: Esben Jannik Bjerrum <esbenjannik AT rocketmail.com>
• [modeller_usage] How to get log file in windows 2004/02/09
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] How to get log file in windows 2004/02/09
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• [modeller_usage] divide__213E> Division by zero, during seq. search 2004/02/10
  • From: Esben Jannik Bjerrum <esbenjannik AT rocketmail.com>
• Re: [modeller_usage] divide__213E> Division by zero, during seq. search 2004/02/10
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] COMMAND line clarification 2004/02/10
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] COMMAND line clarification 2004/02/10
  • From: Shamshad Zarina <szed4 AT yahoo.com>
• RE: [modeller_usage] COMMAND line clarification 2004/02/10
  • From: "Luis Rosales" <ludwig AT biomedicas.unam.mx>
• Re: [modeller_usage] divide__213E> Division by zero, during seq. search 2004/02/11
  • From: Esben Jannik Bjerrum <esbenjannik AT rocketmail.com>
• [modeller_usage] Request for a doubt clarification regarding modelling 2004/02/12
  • From: anthony johnson <janu_khadgam AT yahoo.co.in>
• [modeller_usage] [Mailman] request letter for vlarification of a doubt regarding modelling 2004/02/13
  • From: "anthony johnson" <anthony_johnson AT rediffmail.com>
• [modeller_usage] Fortran Runtime Error 2004/02/15
  • From: Zoee Gokhale <zoe_scom AT yahoo.co.uk>
• Re: [modeller_usage] Fortran Runtime Error 2004/02/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] error in restraints calculation 2004/02/17
  • From: David Giganti <oreste AT pasteur.fr>
• [modeller_usage] docking 2004/02/17
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• Re: [modeller_usage] begginer 2004/02/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Second_line_of_the_alignment 2004/02/19
  • From: "Chupakhin - Чупахин" <vlchupakhin AT yandex.ru>
• [modeller_usage] FAD / FeS topology ? 2004/02/19
  • From: Guenter Fritz <guenter.fritz AT uni-konstanz.de>
• [modeller_usage] modeling homotetramers 2004/02/19
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] mutation 2004/02/20
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• [modeller_usage] Question about running modeller 2004/02/20
  • From: En Yun <gte778m AT mail.gatech.edu>
• [modeller_usage] unrealistic B-factor 0.00 2004/02/20
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• Re: [modeller_usage] modeling homotetramers 2004/02/20
  • From: Oliver Hucke <ohucke AT u.washington.edu>
• [modeller_usage] How to correct Bumps 2004/02/21
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] mutation 2004/02/23
  • From: "Jaimin Shah" <jaimin AT iitb.ac.in>
• Re: [modeller_usage] Question about running modeller 2004/02/23
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] <modeller> objective function?? 2004/02/24
  • From: Stefanie Offermann <Stefanie.Offermann AT cermav.cnrs.fr>
• [modeller_usage] pdf-score 2004/02/25
  • From: marc.gasser AT pharma.ethz.ch
• [modeller_usage] can genetics link with mathematics 2004/02/26
  • From: rathan kar <storagerathan AT yahoo.co.in>
• [modeller_usage] B-factor error is to be ignored in theoretical modelling ? 2004/02/26
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] Adding a ligand 2004/03/01
  • From: Shamshad Zarina <szed4 AT yahoo.com>
• [modeller_usage] reference 2004/03/01
  • From: Manal Swairjo <swairjo AT scripps.edu>
• [modeller_usage] Adding a ligand 2004/03/02
  • From: rleite AT ualg.pt
• [modeller_usage] Virus warning, previous warning was a virus and did not originate from salilab.org 2004/03/02
  • From: Ursula Pieper <ursula AT salilab.org>
• [modeller_usage] modeling protein-DNA complex 2004/03/02
  • From: Betty Shen <bshen AT fhcrc.org>
• [modeller_usage] Request 2004/03/03
  • From: ram kumar <materiabio03 AT yahoo.co.in>
• [modeller_usage] Reply to ram 2004/03/03
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] Request 2004/03/04
  • From: Stefanie Offermann <Stefanie.Offermann AT cermav.cnrs.fr>
• [modeller_usage] FORTRAN runtime errors...and more 2004/03/05
  • From: "Matthias" <thias AT scfarm.unibo.it>
• [modeller_usage] pyroglutamate 2004/03/14
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] ModWeb question 2004/03/15
  • From: alarcon AT lncc.br
• Re: [modeller_usage] pyroglutamate 2004/03/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Adding a ligand 2004/03/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• RE: [modeller_usage] ModWeb question 2004/03/15
  • From: "Eswar Narayanan" <eashwar AT salilab.org>
• [modeller_usage] Any thesis reg modeller project work 2004/03/15
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] Why should add ourself ligand in protein? 2004/03/16
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] Any thesis reg modeller project work 2004/03/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Adding a ligand 2004/03/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] symmetrisation of models 2004/03/17
  • From: Binbin Liu <bmbbl AT bmb.leeds.ac.uk>
• [modeller_usage] Search sequence in modeller not responding...! 2004/03/18
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] symmetrisation of models 2004/03/19
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] problems with the MALIGN command 2004/03/19
  • From: Stefanie Offermann <Stefanie.Offermann AT cermav.cnrs.fr>
• [modeller_usage] Atom index is out of bounds error 2004/03/20
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] OBJECTIVE FUNCTION 2004/03/22
  • From: "Matthias" <thias AT scfarm.unibo.it>
• Re: [modeller_usage] Atom index is out of bounds error 2004/03/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] FORTRAN runtime errors...and more 2004/03/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] OBJECTIVE FUNCTION 2004/03/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Number problem 2004/03/23
  • From: hemant kushwaha <ritturajhemant AT yahoo.com>
• [modeller_usage] side-chain torsion angles 2004/03/24
  • From: Binbin Liu <bmbbl AT bmb.leeds.ac.uk>
• Re: [modeller_usage] side-chain torsion angles 2004/03/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Number problem 2004/03/24
  • From: Oliver Hucke <ohucke AT u.washington.edu>
• Re: [modeller_usage] side-chain torsion angles 2004/03/25
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• Re: [modeller_usage] OBJECTIVE FUNCTION 2004/03/26
  • From: Mickael Krzeminski <mkrzemin AT pasteur.fr>
• Re: [modeller_usage] side-chain torsion angles 2004/03/26
  • From: Mickael Krzeminski <mkrzemin AT pasteur.fr>
• Re: [modeller_usage] side-chain torsion angles 2004/03/26
  • From: "Eric Feyfant" <EFeyfant AT wyeth.com>
• [modeller_usage] modeller errors 2004/03/27
  • From: kambhampati anjaneyulu <kal_124 AT yahoo.com>
• [modeller_usage] The selection of models 2004/03/28
  • From: Binbin Liu <bmbbl AT bmb.leeds.ac.uk>
• Re: [modeller_usage] modeller errors 2004/03/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• RE: [modeller_usage] The selection of models 2004/03/28
  • From: "Eswar Narayanan" <eashwar AT salilab.org>
• [modeller_usage] Can any get Z-score for my target sequence in PROSAII? 2004/03/28
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] The selection of models 2004/03/29
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• Re: [modeller_usage] The selection of models 2004/03/29
  • From: Liu Shiyong <syliu AT mdl.ipc.pku.edu.cn>
• [modeller_usage] Adding ligand in protein will solve sidechain confromatin problem? 2004/03/29
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] Adding ligand in protein will solve sidechainconfromatin problem? 2004/03/29
  • From: "Eric Feyfant" <EFeyfant AT wyeth.com>
• Re: [modeller_usage] Can any get Z-score for my target sequence in PROSAII? 2004/03/29
  • From: Daniel Rigden <drigden AT liverpool.ac.uk>
• Re: [modeller_usage] Adding ligand in protein will solve sidechain confromatin problem? 2004/03/30
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• Re: [modeller_usage] OBJECTIVE FUNCTION 2004/03/30
  • From: "Matthias" <thias AT scfarm.unibo.it>
• [modeller_usage] problem reading alignment file 2004/03/30
  • From: "Clemens Steegborn" <cls2001 AT med.cornell.edu>
• [modeller_usage] Count problem 2004/03/30
  • From: hemant kushwaha <ritturajhemant AT yahoo.com>
• RE: [modeller_usage] problem reading alignment file 2004/03/31
  • From: "Schweikardt, Thorsten" <thorsten AT uni-mainz.de>
• Re: [modeller_usage] problem reading alignment file 2004/03/31
  • From: "Eric Feyfant" <EFeyfant AT wyeth.com>
• [modeller_usage] Re: modeller_usage Digest, Vol 3, Issue 36 2004/03/31
  • From: Azat Badretdinov <azat AT accelrys.com>
• [modeller_usage] Modelling of one conformation, docking another being a problem? 2004/04/01
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] Modeller crashed due to heavy load.....! 2004/04/02
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] Modeller crashed due to heavy load.....! 2004/04/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] residue problem 2004/04/07
  • From: hemant kushwaha <ritturajhemant AT yahoo.com>
• Re: [modeller_usage] residue problem 2004/04/07
  • From: "Eric Feyfant" <EFeyfant AT wyeth.com>
• [modeller_usage] karthik. 2004/04/10
  • From: kambhampati anjaneyulu <kal_124 AT yahoo.com>
• [modeller_usage] Regarding adding ligands to protein... 2004/04/10
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] karthik. 2004/04/11
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] How to extract the backbone conformation alone from template? 2004/04/11
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] Regarding Optimization output ........ 2004/04/11
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] How to get various conformar for a modelled protein? 2004/04/11
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] Re: FW: FAQ 2004/04/12
  • From: phanivijayg AT hotmail.com
• Re: [modeller_usage] Regarding adding ligands to protein... 2004/04/12
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] dynamic restraints 2004/04/12
  • From: "Thomas Duncan" <DuncanT AT upstate.edu>
• Re: [modeller_usage] How to get various conformar for a modelled protein? 2004/04/13
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] regarding chain identifiers ... 2004/04/13
  • From: gowthaman ramasamy <gowtham AT icgeb.res.in>
• Re: [modeller_usage] How to get various conformar for a modelled protein? 2004/04/13
  • From: "Luis Rosales" <ludwig AT biomedicas.unam.mx>
• Re: [modeller_usage] dynamic restraints 2004/04/13
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] How to get various conformar for a modelled protein? 2004/04/14
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] problem with using chain identifiers ... 2004/04/14
  • From: gowthaman ramasamy <gowtham AT icgeb.res.in>
• [modeller_usage] PDB Database updates 2004/04/14
  • From: Nicole Scherer <scherer AT cs.uni-duesseldorf.de>
• [modeller_usage] (no subject) 2004/04/14
  • From: "jeanney.f"<jeanney.f AT mail.fsagx.ac.be>
• Re: [modeller_usage] PDB Database updates 2004/04/14
  • From: Bozidar Yerkovich <bozidar AT salilab.org>
• Re: [modeller_usage] PDB Database updates 2004/04/15
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] Fwd: problem reading alignment file 2004/04/16
  • From: "Clemens Steegborn" <cls2001 AT med.cornell.edu>
• [modeller_usage] alignment seq not found in pdb 2004/04/17
  • From: IPSITA ACHARYA <ipsita_bioinfo AT yahoo.co.in>
• [modeller_usage] Superposition of many model segments 2004/04/19
  • From: Toni Hermoso Pulido <flipe AT bioinf.uab.es>
• [modeller_usage] model a tetramer with Modeller 2004/04/20
  • From: lgan AT smail.uni-koeln.de
• [modeller_usage] some questions.. 2004/04/20
  • From: "Your Name" <thias AT scfarm.unibo.it>
• Re: [modeller_usage] regarding chain identifiers ... 2004/04/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] alignment seq not found in pdb 2004/04/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] B-factor column after Loop refinement in v6 2004/04/22
  • From: "Bissan Al-Lazikani,(4627)" <b.al-lazikani AT inpharmatica.co.uk>
• [modeller_usage] possibility of usage of two force feild at a time for a model building 2004/04/22
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] B-factor column after Loop refinement in v6 2004/04/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] READ_MODEL error: MODEL atom not classified 2004/04/27
  • From: Sascha Tayefeh <sascha AT pc.chemie.tu-darmstadt.de>
• Re: [modeller_usage] READ_MODEL error: MODEL atom not classified 2004/04/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] secondary structure display 2004/04/30
  • From: gowthaman ramasamy <gowtham AT icgeb.res.in>
• Re: [modeller_usage] secondary structure display 2004/04/30
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] help on using modeller 2004/05/02
  • From: rathan kar <storagerathan AT yahoo.co.in>
• Re: [modeller_usage] help on using modeller 2004/05/02
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• [modeller_usage] modeller6v2 on apple macitosh G5 machine. 2004/05/02
  • From: Wonsuhk Uhm <wsum AT istech21.com>
• [modeller_usage] Re: modeller_usage Digest, Vol 3, Issue 51 2004/05/03
  • From: rathan kar <storagerathan AT yahoo.co.in>
• Re: [modeller_usage] help on using modeller 2004/05/03
  • From: rathan kar <storagerathan AT yahoo.co.in>
• Re: [modeller_usage] help on using modeller 2004/05/03
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] modeller6v2 on apple macitosh G5 machine. 2004/05/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Fwd: homology-based secondary structure modelling 2004/05/04
  • From: Amanda Preston <amandaraepreston AT yahoo.com>
• [modeller_usage] loop refinement 2004/05/05
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• Re: [modeller_usage] loop refinement 2004/05/05
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• Re: [modeller_usage] Fwd: homology-based secondary structure modelling 2004/05/05
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] alignment file! 2004/05/06
  • From: Yue Yun <yyun AT artsci.wustl.edu>
• [modeller_usage] Help!! 2004/05/06
  • From: "Chaitanya Reddy.A" <chaitanya AT msitprogram.net>
• Re: [modeller_usage] Help!! 2004/05/07
  • From: Nataraj Balkrishnan <natarajmtech AT yahoo.co.uk>
• Re: [modeller_usage] Help!! 2004/05/07
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• Re: [modeller_usage] alignment file! 2004/05/07
  • From: Darren Thompson <thompson AT chemistry.ucsc.edu>
• [modeller_usage] different results running mod6v2 on diff OS 2004/05/16
  • From: nurul bahiyah <bahiyahn AT tm.net.my>
• [modeller_usage] toppar files for Charmm and X-plor 2004/05/16
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] objective function 2004/05/17
  • From: Gianluca Croce <gianluca.croce AT mfn.unipmn.it>
• Re: [modeller_usage] different results running mod6v2 on diff OS 2004/05/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] objective function 2004/05/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Restricting to Strand 2004/06/07
  • From: John Penniston <john AT penniston.com>
• [modeller_usage] Question about Make_restraints 2004/06/08
  • From: Alejandra Leo <aleo AT cbm.uam.es>
• Re: [modeller_usage] Question about Make_restraints 2004/06/08
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• [modeller_usage] CHECK_ALIGNMENT accepts it, but ROUTINE = 'model' does not. 2004/06/08
  • From: Javier Satulovsky <satulovsky AT mailblocks.com>
• [modeller_usage] hello sir 2004/06/13
  • From: "V Nadeem Ahmad" <vnadeem AT ibab.ac.in>
• [modeller_usage] using modeller under Xp 2004/06/17
  • From: "Edoardo Saccenti" <saccenti AT cerm.unifi.it>
• [modeller_usage] Chimeric model 2004/06/17
  • From: Benoit Charloteaux <charloteaux.b AT fsagx.ac.be>
• Re: [modeller_usage] using modeller under Xp 2004/06/17
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• Re: [modeller_usage] Chimeric model 2004/06/17
  • From: Liu Shiyong <syliu AT mdl.ipc.pku.edu.cn>
• [modeller_usage] problem with structures 2004/06/21
  • From: "Marcin Hus" <mhus AT panaceum.am.lublin.pl>
• [modeller_usage] unsuscribe 2004/06/22
  • From: En Yun <skye_dive AT yahoo.com>
• [modeller_usage] unsuscribe 2004/06/22
  • From: Luca Mollica <mollica.luca AT hsr.it>
• [modeller_usage] Energy profile 2004/06/22
  • From: "mturano" <mturano AT foodsci.unibo.it>
• [modeller_usage] Optimization/Refinement of Models 2004/06/22
  • From: Cvetan Stojkoski <cvetan.stojkoski AT adelaide.edu.au>
• [modeller_usage] some food for thought... 2004/06/23
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• Re: [modeller_usage] some food for thought... 2004/06/23
  • From: Cvetan Stojkoski <cvetan.stojkoski AT adelaide.edu.au>
• [modeller_usage] too slow... 2004/06/24
  • From: "noha lim" <limnoha AT hotmail.com>
• Re: [modeller_usage] too slow... 2004/06/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Two templates 2004/06/25
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] Nucleic Acids and modeller 2004/06/25
  • From: "Luis Rosales" <ludwig AT biomedicas.unam.mx>
• [modeller_usage] modelling proteins with multiple chains... 2004/06/28
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• [modeller_usage] optimization problem... 2004/06/30
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• Re: [modeller_usage] optimization problem... 2004/06/30
  • From: "Eric Feyfant" <EFeyfant AT wyeth.com>
• [modeller_usage] Problem with PDB file 2004/06/30
  • From: Lucas Bleicher <lbleicher AT yahoo.com>
• Re: [modeller_usage] Problem with PDB file 2004/06/30
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] 2quest.: howto add restraints & rand_seed 2004/07/01
  • From: Sascha Tayefeh <sascha AT pc.chemie.tu-darmstadt.de>
• [modeller_usage] bbs suggestion 2004/07/01
  • From: zjnjuct <zjnjuct AT yahoo.com>
• Re: [modeller_usage] 2quest.: howto add restraints & rand_seed 2004/07/02
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• Re: [modeller_usage] bbs suggestion 2004/07/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem with structures 2004/07/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Nucleic Acids and modeller 2004/07/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] modeller as an optimizer, not as a modeller?? 2004/07/05
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• [modeller_usage] Special distance restraints weighting 2004/07/06
  • From: "Schweikardt, Thorsten" <thorsten AT uni-mainz.de>
• [modeller_usage] Help on align.top 2004/07/06
  • From: Liu Shiyong <syliu AT mdl.ipc.pku.edu.cn>
• [modeller_usage] Nucleic Acids and modeller (cont...) 2004/07/06
  • From: "Luis Rosales" <ludwig AT biomedicas.unam.mx>
• [modeller_usage] pseudo-atom usage? 2004/07/12
  • From: Daniel Rigden <drigden AT liverpool.ac.uk>
• [modeller_usage] modeller problem 2004/07/13
  • From: shantanu gautam <shantanu_iitkgp AT yahoo.co.in>
• [modeller_usage] loop modelling with secondary structure 2004/07/14
  • From: "John Simms" <JXS818 AT bham.ac.uk>
• [modeller_usage] beta strand restriction 2004/07/14
  • From: "John Simms" <JXS818 AT bham.ac.uk>
• [modeller_usage] distance-dependent dielectric const.?? 2004/07/14
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• [Fwd: [modeller_usage] beta strand restriction] 2004/07/14
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] modeller problem 2004/07/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [Fwd: [modeller_usage] beta strand restriction] 2004/07/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] modeller as an optimizer, not as a modeller?? 2004/07/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] distance-dependent dielectric const.?? 2004/07/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] announcing normal mode analysis web server ElNemo 2004/07/15
  • From: Karsten Suhre <Karsten.Suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] soaking in aqueous medium... 2004/07/15
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• Re: [modeller_usage] modeller problem 2004/07/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] (no subject) 2004/07/16
  • From: karl schweighofer <karl AT schwag.arc.nasa.gov>
• [modeller_usage] MODELLER file archive 2004/07/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] pseudo-atom usage? 2004/07/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] (no subject) 2004/07/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Restraints Problem 2004/07/16
  • From: "akshay17" <akshay17 AT olemiss.edu>
• Re: [modeller_usage] Restraints Problem 2004/07/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Error: Array too small. Increase MAXBND 2004/07/16
  • From: K S Doctor <ksdoctor AT fastmail.us>
• [modeller_usage] loop positioning 2004/07/17
  • From: "John Simms" <jxs818 AT bham.ac.uk>
• [modeller_usage] RMS and DRMS functions of COMPARE 2004/07/19
  • From: Binbin Liu <bmbbl AT bmb.leeds.ac.uk>
• [modeller_usage] RMS and DRMS functions of COMPARE again 2004/07/19
  • From: Binbin Liu <bmbbl AT bmb.leeds.ac.uk>
• Re: [modeller_usage] Restraints Problem 2004/07/19
  • From: "akshay17" <akshay17 AT olemiss.edu>
• [modeller_usage] core dumped when reading my restraint file 2004/07/20
  • From: daniele bemporad <danibemp AT yahoo.com>
• Re: [modeller_usage] Restraints Problem 2004/07/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] core dumped when reading my restraint file 2004/07/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] core dumped when reading my restraint file 2004/07/21
  • From: daniele bemporad <danibemp AT yahoo.com>
• Re: [modeller_usage] Restraints Problem 2004/07/21
  • From: "akshay17" <akshay17 AT olemiss.edu>
• Re: [modeller_usage] Restraints Problem 2004/07/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] core dumped when reading my restraint file 2004/07/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] error STDEV < 0 (no lig in second template) 2004/07/22
  • From: Jacques Zylberg <zylberj1 AT mail.biu.ac.il>
• [modeller_usage] Array overflow error? 2004/07/22
  • From: Evans Adolfo Tapia <etapia AT cs.purdue.edu>
• [modeller_usage] randomize...why do it ?? 2004/07/22
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• Re: [modeller_usage] Array overflow error? 2004/07/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Installation prob on linux 2004/07/22
  • From: Joel Tyndall <joel.tyndall AT stonebow.otago.ac.nz>
• [modeller_usage] modeling mutations 2004/07/23
  • From: "Miguel Relloso-Cereceda" <mrelloso AT rics.bwh.harvard.edu>
• Re: [modeller_usage] Restraints Problem 2004/07/23
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] modeling mutations 2004/07/26
  • From: Mickael Krzeminski <mkrzemin AT pasteur.fr>
• [modeller_usage] Some Doubts 2004/07/27
  • From: Elton Jose Rosas de Vasconcelos <elton AT lcc.uece.br>
• [modeller_usage] Dimer modelling with metals 2004/07/27
  • From: "V Nadeem Ahmad" <vnadeem AT ibab.ac.in>
• RE: [modeller_usage] Some Doubts 2004/07/28
  • From: "Schweikardt, Thorsten" <thorsten AT uni-mainz.de>
• [modeller_usage] More Doubts. 2004/07/28
  • From: Elton Jose Rosas de Vasconcelos <elton AT lcc.uece.br>
• RE: [modeller_usage] More Doubts - missing aminoacids in template 2004/07/29
  • From: "Schweikardt, Thorsten" <thorsten AT uni-mainz.de>
• [modeller_usage] Loop refinement and symmetry 2004/07/29
  • From: "David Piper" <piper AT xserve.cvrti.utah.edu>
• RE: [modeller_usage] More Doubts 2004/07/30
  • From: Cesar Avila <avila_cesar79 AT yahoo.com.ar>
• [modeller_usage] Does Modeller work on x86_64? 2004/07/30
  • From: benne278 <benne278 AT umn.edu>
• Re: [modeller_usage] Does Modeller work on x86_64? 2004/08/02
  • From: Tru Huynh <tru AT pasteur.fr>
• [modeller_usage] few minute problems 2004/08/11
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] very low sequence identity... 2004/08/21
  • From: "limnoha" <limnoha AT hotmail.com>
• [modeller_usage] problem 2004/08/23
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] Hetatm error 2004/08/23
  • From: Shamshad Zarina <szed4 AT yahoo.com>
• Re: [modeller_usage] problem 2004/08/23
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] problem_2 2004/08/25
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] problem_2 2004/08/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] A word on beta (strand) restraints 2004/08/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] MAXATM 2004/08/25
  • From: bcur001 AT ec.auckland.ac.nz
• [modeller_usage] error on hetatm modelling 2004/08/26
  • From: "V Nadeem Ahmad" <vnadeem AT ibab.ac.in>
• Re: [modeller_usage] error on hetatm modelling 2004/08/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] MAXATM 2004/08/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] restraining dihedral angles 2004/08/29
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] constraining backbone atoms using modeller? 2004/08/30
  • From: "Diana C.Mustard" <dmustard AT csd.abdn.ac.uk>
• [modeller_usage] few problems 2004/08/30
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] (no subject) 2004/08/30
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• [modeller_usage] multi-chain modelling 2004/08/30
  • From: "V.Nadeem Ahmad" <vnadeem AT ibab.ac.in>
• [modeller_usage] should there be entries of SSBOND after patch_ss_template in target model? 2004/08/30
  • From: dougyoung AT tmicha.net
• Re: [modeller_usage] restraining dihedral angles 2004/08/30
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] constraining backbone atoms using modeller? 2004/08/31
  • From: "Thomas Duncan" <DuncanT AT upstate.edu>
• [modeller_usage] Extracting alignment from already superposed structures 2004/09/02
  • From: "Higueruelo Alicia (CAM)" <alicia.higueruelo AT celltechgroup.com>
• [modeller_usage] Error message: Array too small. Increase MAXSEG 2004/09/02
  • From: "Nancy Yu" <nancyyu AT imb.sinica.edu.tw>
• [modeller_usage] problem! 2004/09/02
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] Error message: Array too small. Increase MAXSEG 2004/09/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] problem_again 2004/09/06
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] problem_again 2004/09/10
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Announcing MODELLER 7v7 2004/09/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Problem with alignment file 2004/09/17
  • From: 柳田　亮 <charlesy AT kais.kyoto-u.ac.jp>
• RE: [modeller_usage] Problem with alignment file 2004/09/17
  • From: "Schweikardt, Thorsten" <thorsten AT uni-mainz.de>
• Re: [modeller_usage] Problem with alignment file 2004/09/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Defining the centre of a helix and restraints 2004/09/20
  • From: "John Simms" <JXS818 AT bham.ac.uk>
• [modeller_usage] Crash under 7v7 2004/09/20
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] Crash under 7v7 2004/09/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Crash under 7v7 2004/09/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Defining the centre of a helix and restraints 2004/09/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] problem 2004/09/23
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] problem 2004/09/23
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] problem 2004/09/27
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] use NMR as template 2004/09/27
  • From: remo <remo AT biocomp.unibo.it>
• RE: [modeller_usage] use NMR as template 2004/09/27
  • From: "Luis Rosales" <ludwig AT biomedicas.unam.mx>
• Re: [modeller_usage] problem 2004/09/29
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Modeller 7v7 AIX binary: now available 2004/10/01
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] PDB updates for Modeller 2004/10/02
  • From: Bruno Afonso <brunomiguel AT dequim.ist.utl.pt>
• Re: [modeller_usage] PDB updates for Modeller 2004/10/02
  • From: Eswar Narayanan <eashwar AT salilab.org>
• Re: [modeller_usage] PDB updates for Modeller 2004/10/03
  • From: Bruno Afonso <brunomiguel AT dequim.ist.utl.pt>
• Re: [modeller_usage] PDB updates for Modeller 2004/10/04
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] Hard limits for size of sequence database 2004/10/04
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] Markus Jaritz is out of the office. 2004/10/04
  • From: markus.jaritz AT pharma.novartis.com
• Re: [modeller_usage] PDB updates for Modeller 2004/10/04
  • From: Eswar Narayanan <eashwar AT salilab.org>
• Re: [modeller_usage] PDB updates for Modeller 2004/10/04
  • From: Eswar Narayanan <eashwar AT salilab.org>
• Re: [modeller_usage] Hard limits for size of sequence database 2004/10/06
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Hard limits for size of sequence database 2004/10/07
  • From: J B Procter <procter AT zbh.uni-hamburg.de>
• [modeller_usage] error on 'special_patches' routine for PATCH S-S bonds 2004/10/12
  • From: "Dr. Daniel James White PhD" <dan AT chalkie.org.uk>
• [modeller_usage] bumps in model 2004/10/13
  • From: Marc Gasser <marc.gasser AT pharma.ethz.ch>
• [modeller_usage] Alignment file. 2004/10/13
  • From: bcur001 AT ec.auckland.ac.nz
• Re: [modeller_usage] bumps in model 2004/10/13
  • From: Marc Gasser <marc.gasser AT pharma.ethz.ch>
• [modeller_usage] hetatms placed far away from the backbone 2004/10/13
  • From: Michael Knoll <michael.knoll AT itb.uni-stuttgart.de>
• Re: [modeller_usage] Alignment file. 2004/10/13
  • From: Eswar Narayanan <eashwar AT salilab.org>
• [modeller_usage] Modeller stopped with no specific error message 2004/10/18
  • From: "서주현"<seojoohyun AT nate.com>
• [modeller_usage] calling subroutine defsym 2004/10/19
  • From: "amc" <hchoe AT amc.seoul.kr>
• RE: [modeller_usage] Modeller stopped with no specific error message 2004/10/19
  • From: "amc" <hchoe AT amc.seoul.kr>
• [modeller_usage] where can I get file.crv file.cav by write_date 2004/10/20
  • From: Shu-Qun Liu <shuqunliu AT tsinghua.org.cn>
• RE: [modeller_usage] calling subroutine defsym 2004/10/20
  • From: "amc" <hchoe AT amc.seoul.kr>
• Re: [modeller_usage] calling subroutine defsym 2004/10/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Modeller stopped with no specific error message 2004/10/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] hetatms placed far away from the backbone 2004/10/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: where can I get file.crv file.cav by write_date 2004/10/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] multiple alignment... 2004/10/22
  • From: "limnoha" <limnoha AT hotmail.com>
• Re: [modeller_usage] error on 'special_patches' routine for PATCH S-S bonds 2004/10/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] multiple alignment... 2004/10/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Error" Array too small. Increase MAXBND" 2004/10/26
  • From: Youbin Tu <ytu AT mix.wvu.edu>
• [modeller_usage] Merge twp alignment files 2004/10/26
  • From: "HYUN CHUL KIM" <sundol AT kribb.re.kr>
• [modeller_usage] Protein with uracil 2004/10/27
  • From: Michel Seigneuret <seigneuret AT cochin.inserm.fr>
• Re: [modeller_usage] Error" Array too small. Increase MAXBND" 2004/10/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Protein with uracil 2004/10/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] where to put the ligand? 2004/10/27
  • From: Youbin Tu <ytu AT mix.wvu.edu>
• [modeller_usage] Frustrating simple problem! 2004/10/31
  • From: Joel Tyndall <joel.tyndall AT otago.ac.nz>
• RE: [modeller_usage] Frustrating simple problem! 2004/11/01
  • From: Joel Tyndall <joel.tyndall AT otago.ac.nz>
• [modeller_usage] Unknown residue type,position,sequence...... 2004/11/02
  • From: "서주현"<seojoohyun AT nate.com>
• RE: [modeller_usage] Unknown residue type,position,sequence...... 2004/11/04
  • From: "amc" <hchoe AT amc.seoul.kr>
• Re: [modeller_usage] Merge twp alignment files 2004/11/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] basic example erros 2004/11/05
  • From: "butheryin" <butheryin AT 163.com>
• [modeller_usage] Helix Packing:Docking? 2004/11/05
  • From: "David Piper" <piper AT xserve.cvrti.utah.edu>
• Re: [modeller_usage] basic example erros 2004/11/05
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] (senza oggetto) 2004/11/10
  • From: "Matthias Negri" <thias AT scfarm.unibo.it>
• [modeller_usage] Modeller vs Prime or MOE 2004/11/12
  • From: "Stradella, Omar" <Omar.Stradella AT mpi.com>
• [modeller_usage] model a peptide 2004/11/13
  • From: aseem mishra <aseem_biotech AT yahoo.co.in>
• Re: [modeller_usage] Modeller vs Prime or MOE 2004/11/13
  • From: Ed Allen Smith <easmith AT beatrice.rutgers.edu>
• [modeller_usage] (no subject) 2004/11/14
  • From: Praveen Madala <P.Madala AT imb.uq.edu.au>
• Re: [modeller_usage] model a peptide 2004/11/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: your mail 2004/11/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] (no subject) 2004/11/15
  • From: anagha AT mbu.iisc.ernet.in
• Re: [modeller_usage] (no subject) 2004/11/15
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] wrong topology for the ligand? 2004/11/15
  • From: Youbin Tu <ytu AT mix.wvu.edu>
• RE: [modeller_usage] wrong topology for the ligand? 2004/11/16
  • From: "Higueruelo Alicia (CAM)" <alicia.higueruelo AT celltechgroup.com>
• Re: [modeller_usage] wrong topology for the ligand? 2004/11/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] wrong topology for the ligand? 2004/11/16
  • From: Cvetan Stojkoski <cvetan.stojkoski AT adelaide.edu.au>
• [modeller_usage] Problems with Modeller 7v7 in windows XP 2004/11/16
  • From: Alfonso Mendez <amtenorio2000 AT yahoo.com.mx>
• Re: RE: [modeller_usage] wrong topology for the ligand? 2004/11/17
  • From: Youbin Tu <ytu AT mix.wvu.edu>
• Re: RE: [modeller_usage] wrong topology for the ligand? 2004/11/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: RE: [modeller_usage] wrong topology for the ligand? 2004/11/17
  • From: Cvetan Stojkoski <cvetan.stojkoski AT adelaide.edu.au>
• [modeller_usage] restraints problem, core dumped 2004/11/18
  • From: "Praveen Madala" <p.madala AT imb.uq.edu.au>
• Re: [modeller_usage] restraints problem, core dumped 2004/11/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] (no subject) 2004/11/18
  • From: Leonardo René Lareo <l.lareo AT javeriana.edu.co>
• [modeller_usage] combining two proteins 2004/11/18
  • From: "Han Choe" <hchoe AT amc.seoul.kr>
• Re: RE: [modeller_usage] wrong topology for the ligand? 2004/11/19
  • From: Youbin Tu <ytu AT mix.wvu.edu>
• [modeller_usage] upper and lower distance restraints 2004/11/19
  • From: Youbin Tu <ytu AT mix.wvu.edu>
• [modeller_usage] Modelling multiple chains 2004/11/22
  • From: gerald.quon AT utoronto.ca
• [modeller_usage] problem 2004/11/23
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] How to preserve internal coordinates for identical residues 2004/11/29
  • From: "James T Metz" <james.metz AT abbott.com>
• Re: [modeller_usage] upper and lower distance restraints 2004/11/29
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Modelling multiple chains 2004/11/29
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem 2004/11/29
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] combining two proteins 2004/11/29
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] multi domain protein help 2004/11/30
  • From: Ranjit Kumar <ranjit AT biochem.iisc.ernet.in>
• Re: [modeller_usage] multi domain protein help 2004/12/01
  • From: "Mr.Sridhar" <sridhar AT www.cdfd.org.in>
• [modeller_usage] chain identifiers 2004/12/02
  • From: "John Simms" <JXS818 AT bham.ac.uk>
• [modeller_usage] Extend the helix 2004/12/02
  • From: "Narasimhamurthy." <taterao AT physics.iisc.ernet.in>
• [modeller_usage] alignment question 2004/12/07
  • From: "Aline Rossi" <aline AT lncc.br>
• Re: [modeller_usage] alignment question 2004/12/07
  • From: aline <aline AT lncc.br>
• [modeller_usage] Bad Model 2004/12/08
  • From: A R <adamgirl_modeller AT yahoo.co.uk>
• [modeller_usage] Script for superimposing generated models 2004/12/10
  • From: Ivan Bosanac <ibosanac AT uhnres.utoronto.ca>
• [modeller_usage] How to constrain internal coordinates for identical residues 2004/12/10
  • From: "James T Metz" <james.metz AT abbott.com>
• [modeller_usage] array problem 2004/12/16
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] Bad Model 2004/12/16
  • From: Joao Renato Carvalho Muniz <jrcmuniz AT if.sc.usp.br>
• Re: [modeller_usage] array problem 2004/12/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Script for superimposing generated models 2004/12/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] "Precision problem" 2004/12/17
  • From: Oliver Hucke <ohucke AT u.washington.edu>
• [modeller_usage] Regarding the running of modeller on SGI machine 2004/12/21
  • From: Vohra S <svohra AT essex.ac.uk>
• Re: [modeller_usage] "Precision problem" 2004/12/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Regarding the running of modeller on SGI machine 2004/12/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Regarding the running of modeller on SGI machine 2004/12/21
  • From: Eric Bennett <ericb AT pobox.com>
• [modeller_usage] is it a bug? 2004/12/21
  • From: WHONG Tienwynn <genejacob AT yahoo.com.cn>
• [modeller_usage] Problems with stereo-chemical fixing of Hydrogen atoms 2004/12/22
  • From: Ravi Rathore <rnsrathore AT yahoo.com>
• [modeller_usage] Superposition problem 2004/12/23
  • From: Shamshad Zarina <szed4 AT yahoo.com>
• Re: [modeller_usage] (no subject) 2004/12/28
  • From: Anagha Joshi <anagha AT mbu.iisc.ernet.in>
• Re: [modeller_usage] Problems with stereo-chemical fixing of Hydrogen atoms 2004/12/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] (no subject) 2004/12/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Superposition problem 2004/12/29
  • From: Modeller Caretaker <modeller-care@ucsf.edu>