Re: [modeller_usage] Script for superimposing generated models

[Modeller Caretaker <>]

On Fri, Dec 10, 2004 at 10:12:08AM -0500, Ivan Bosanac wrote:
> I have been having some problems superimposing generated models on top
> of my template coordinance.  I have used SET FINAL_MALIGN3D = 1 command
> in my top file but not *_fit files were given.  This is puzzling to me
> since using the same top script for a different modeling job worked well
> and *_fit files were generated.  Let me say that I am very new to
> Modeller, and script driven software in general, and for that reason
> would greatly appreciate if somebody could explain to me why *_fit files
> were not created.  Moreover, I would be very grateful if somebody could
> provide me with the script that could be used for the purpose of
> superimposing .B999000* onto the template file after top script has been
> executed.  Thanks in advance,

That seems odd. If you haven't solved your problem yet, send me your
input files (ideally one set which works, and one which doesn't) and
I'll take a look.

	Ben Webb, Modeller Caretaker
-- 
             http://www.salilab.org/modeller/
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