when I try to run the basic model tutorial at modeller site
I run align2d.top
I get warning
mkapsa__293W> No TOPOLOGY_LIB is in memory. Use READ_TOPOLOGY to read one.
iup2crm_280W> No TOPOLOGY_LIB in memory or assigning a BLK residue.
Default CHARMM atom type assigned: C --> CT2
This message is written only for the first such atom.
fndatmi_285W> Number of residues <> number of atoms; atom code: 668
66
6 CA
fndatmi_285W> Number of residues <> number of atoms; atom code: 668
66
6 CA
I
don,t
understand what this warning is.
so what shall I do.
when I add READ_TOPOLOGY command I get error
please help me out
thank you
On Mon, 15 Nov 2004, Modeller Caretaker wrote:
> On Tue, Nov 16, 2004 at 10:53:22AM +0530, wrote:
> > I am new to modeller user and also to linux system.
> > i have downloaded and installed modeller
> > But as it doent have GUI.
> > How will I start using it.
>
> You can find basic starting instructions at
> http://salilab.org/modeller/release.html#start
>
> See also the Modeller online tutorial at
> http://salilab.org/modeller/tutorial/
>
> Ben Webb, Modeller Caretaker
>