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Re: [modeller_usage] tutorial on mod7v7

Paula R. Kuser Falcão wrote:

I am trying to do the modeller tutorial on a linux machine,
with version mod7v7.

It looks like you've forgotten to call READ_SEQUENCE_DB before calling 
SEQUENCE_SEARCH. The tutorial reads:

SET SEARCH_RANDOMIZATIONS = 100
SET FILE = 'TvLDH.ali'
READ_SEQUENCE_DB
SEQUENCE_SEARCH ALIGN_CODES = 'TvLDH', DATA_FILE  = ON


Without a sequence database, you have nothing to search against, so it's 
not surprising that you get no results.

	Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage