Modeller_Usage Mailing List (by date)

• Thread Index

• [modeller_usage] Modeller 7v7 Stack problems, tried EVERYTHING!!!! 2005/01/13
  • From: Tom Petty <tpetty AT mail.med.upenn.edu>
• [modeller_usage] Re: modeller_usage Digest, Vol 4, Issue 1 2005/01/13
  • From: rathan kar <storagerathan AT yahoo.co.in>
• [modeller_usage] Disulfide bonds in dimer 2005/01/14
  • From: Vladimir Chupakhin <chupvl AT org.chem.msu.su>
• [modeller_usage] Modeller multiple alignment 2005/01/14
  • From: "Andreas Kowarsch" <kowarsch AT cip.ifi.lmu.de>
• [modeller_usage] question 2005/01/18
  • From: "drugdesign" <drugdesign AT yandex.ru>
• RE: [modeller_usage] question 2005/01/18
  • From: "Schweikardt, Thorsten" <thorsten AT uni-mainz.de>
• Re: [modeller_usage] question 2005/01/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Modeller 7v7 Stack problems, tried EVERYTHING!!!! 2005/01/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Modeller multiple alignment 2005/01/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] doubt regarding modller usage 2005/01/22
  • From: E rajakumar <e_rajakumar AT yahoo.com>
• [modeller_usage] Question on an error message 2005/01/22
  • From: "Cen Gao" <cgao AT mail.rochester.edu>
• Re: [modeller_usage] Question on an error message 2005/01/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] doubt regarding modller usage 2005/01/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] (no subject) 2005/01/23
  • From: "Johnwin Silvester" <johnwin AT rediffmail.com>
• [modeller_usage] (no subject) 2005/01/23
  • From: "Johnwin Silvester" <johnwin AT rediffmail.com>
• Other STACK PROBLEMS and Re: [modeller_usage] Modeller 7v7 Stack problems, tried EVERYTHING!!!! 2005/01/24
  • From: "Carlos Luiz N. dos SANTOS" <carlos AT isima.fr>
• Re: Other STACK PROBLEMS and Re: [modeller_usage] Modeller 7v7 Stack problems, tried EVERYTHING!!!! 2005/01/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Disulfide bonds in dimer 2005/01/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] align2d again 2005/01/27
  • From: "Carlos Luiz N. dos SANTOS" <carlos AT isima.fr>
• Re: [modeller_usage] align2d again 2005/01/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] restraints on accessibility 2005/01/28
  • From: Remo Calabrese <remo AT biocomp.unibo.it>
• [modeller_usage] problem 2005/01/28
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] problem 2005/01/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem 2005/01/28
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] Inclusion of zinc atoms, Add_restraint problem? 2005/01/28
  • From: "Cardenas, Alfredo" <cardenas AT cas.usf.edu>
• Re: [modeller_usage] Inclusion of zinc atoms, Add_restraint problem? 2005/01/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Inclusion of zinc atoms, Add_restraint problem? 2005/01/28
  • From: "Cardenas, Alfredo" <cardenas AT cas.usf.edu>
• [modeller_usage] regarding alignement . 2005/01/28
  • From: E rajakumar <e_rajakumar AT yahoo.com>
• [modeller_usage] problems running scripts under mod7v7 2005/01/31
  • From: Edoardo Saccenti <saccenti AT cerm.unifi.it>
• Re: [modeller_usage] problems running scripts under mod7v7 2005/01/31
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] restraints on accessibility 2005/01/31
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] modelling heterodimer. 2005/02/01
  • From: "DUVVURU Raja" <raja.duvvuru AT unifr.ch>
• [modeller_usage] problem! 2005/02/01
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] SO4 ion coordinates not written 2005/02/01
  • From: "Cheri M Turman" <Cheri.M.Turman AT uth.tmc.edu>
• [modeller_usage] SO4 ion coordinates not written 2005/02/02
  • From: "Cheri M Turman" <Cheri.M.Turman AT uth.tmc.edu>
• [modeller_usage] Re: Inclusion of zinc atoms, Add_restraint problem? 2005/02/02
  • From: "Cardenas, Alfredo" <cardenas AT cas.usf.edu>
• [modeller_usage] clustering problem 2005/02/03
  • From: Xin Hu <hux AT mail.rockefeller.edu>
• [modeller_usage] Re: SO4 ion coordinates not written 2005/02/03
  • From: "Cheri M Turman" <Cheri.M.Turman AT uth.tmc.edu>
• [modeller_usage] dymer modelling 2005/02/04
  • From: "Edoardo Saccenti" <saccenti AT cerm.unifi.it>
• [modeller_usage] Re: Inclusion of zinc atoms, Add_restraint problem? 2005/02/04
  • From: "Cardenas, Alfredo" <cardenas AT cas.usf.edu>
• [modeller_usage] a question about SEQUENCE_SEARCH 2005/02/04
  • From: <yunierkis AT uclv.edu.cu>
• Re: [modeller_usage] a question about SEQUENCE_SEARCH 2005/02/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Re: SO4 ion coordinates not written 2005/02/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] another stack overflow 2005/02/05
  • From: "DUVVURU Raja" <raja.duvvuru AT unifr.ch>
• [modeller_usage] problems defining a new residue type 2005/02/07
  • From: barmalay alterman <barmalay03 AT yahoo.com>
• [modeller_usage] Re: problems defining a new residue type (continued) 2005/02/08
  • From: barmalay alterman <barmalay03 AT yahoo.com>
• [modeller_usage] Modeller Help: New User 2005/02/10
  • From: "Chaminda Basnayake" <cbasnaya AT ucalgary.ca>
• [modeller_usage] (no subject) 2005/02/10
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• [modeller_usage] redundant error check_a_337E> Structure not read in: 1 2005/02/16
  • From: "Nicolas" <bischler AT eie.gr>
• [modeller_usage] how to predict the model as a dimer 2005/02/17
  • From: Tong Chen <Tong.Chen AT flinders.edu.au>
• [modeller_usage] Distances longer than 8.0 Angstrom? 2005/02/18
  • From: Amjad Farooq <amjadfarooq AT yahoo.com>
• Re: [modeller_usage] Distances longer than 8.0 Angstrom? 2005/02/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] COVALENT_CYS 2005/02/20
  • From: "Ori Kalid" <kalido AT mail.biu.ac.il>
• [modeller_usage] setting the DEVIATION 2005/02/20
  • From: "Ori Kalid" <kalido AT mail.biu.ac.il>
• [modeller_usage] Atom Index is out of bounds: 2005/02/21
  • From: Amjad Farooq <amjad AT farooqlab.ws>
• Re: [modeller_usage] setting the DEVIATION 2005/02/21
  • From: Karsten Suhre <karsten.suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] Regarding modelling 2005/02/21
  • From: rajesh rengaraj <rajesh_rengaraj AT yahoo.co.in>
• [modeller_usage] protein-ligand complex 2005/02/21
  • From: "Praveen Madala" <p.madala AT imb.uq.edu.au>
• Re: [modeller_usage] (no subject) 2005/02/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Optimization or Refinement of Homology Model 2005/02/22
  • From: "David Piper" <piper AT xserve.cvrti.utah.edu>
• Re: [modeller_usage] Optimization or Refinement of Homology Model 2005/02/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] new to modeller - optimization of homology model 2005/03/01
  • From: "Scavetta, Robert D." <Scavetta.Robert AT mayo.edu>
• [modeller_usage] docking software 2005/03/04
  • From: Tong Chen <Tong.Chen AT flinders.edu.au>
• [modeller_usage] bug report 2005/03/05
  • From: "prakesh amresh" <prakash_amresh AT rediffmail.com>
• Re: [modeller_usage] bug report 2005/03/06
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] modeller error 2005/03/07
  • From: rathankar rao <rathankar AT yahoo.com>
• Re: [modeller_usage] modeller error 2005/03/07
  • From: "Raghurama P. Hegde" <rph AT physics.iisc.ernet.in>
• [modeller_usage] Question about restraints 2005/03/08
  • From: akiheikk AT mappi.helsinki.fi
• Re: [modeller_usage] Question about restraints 2005/03/08
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Problem running modeller7v7 2005/03/09
  • From: sritin AT ibab.ac.in
• Re: [modeller_usage] Problem running modeller7v7 2005/03/09
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Unknown residue type, position, sequence... 2005/03/10
  • From: "서주현"<seojoohyun AT nate.com>
• Re: [modeller_usage] Unknown residue type, position, sequence... 2005/03/10
  • From: Joel Tyndall <joel.tyndall AT otago.ac.nz>
• [modeller_usage] modeller running-help 2005/03/10
  • From: Elavazhagan <elavv2003 AT gmail.com>
• Re: [modeller_usage] modeller running-help 2005/03/10
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] help 2005/03/11
  • From: "arul prakasam peter" <harul_pup AT rediffmail.com>
• [modeller_usage] amino acid numbering 2005/03/11
  • From: Michael Grabe <mgrabe AT itsa.ucsf.edu>
• Re: [modeller_usage] amino acid numbering 2005/03/11
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: modeller running-help 2005/03/12
  • From: Elavazhagan <elavv2003 AT gmail.com>
• [modeller_usage] help 2005/03/12
  • From: arul prakasam <harul_pup AT yahoo.co.in>
• [modeller_usage] Re: modeller running-help 2005/03/12
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Modeller7v7 on Fedora core 2 2005/03/14
  • From: Xiao-Ping Zhang <xpzhang AT ucdavis.edu>
• [modeller_usage] problem_again 2005/03/14
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] Modeller7v7 on Fedora core 2 2005/03/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem_again 2005/03/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem_again 2005/03/14
  • From: vsharma <vsharma AT mappi.helsinki.fi>
• [modeller_usage] Regarding manual protein sequence alignment 2005/03/15
  • From: rajesh rengaraj <rajesh_rengaraj AT yahoo.co.in>
• Re: [modeller_usage] Regarding manual protein sequence alignment 2005/03/15
  • From: Karsten Suhre <karsten.suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] Re: Regarding manual protein sequence alignment 2005/03/15
  • From: Michal Kurowski <michal AT genesilico.pl>
• Re: [modeller_usage] Regarding manual protein sequence alignment 2005/03/15
  • From: "Luis Rosales" <ludwig AT correo.biomedicas.unam.mx>
• Re: [modeller_usage] Regarding manual protein sequence alignment 2005/03/15
  • From: "Luis Rosales" <ludwig AT correo.biomedicas.unam.mx>
• [modeller_usage] Thanks to our groups for quick response 2005/03/15
  • From: rajesh rengaraj <rajesh_rengaraj AT yahoo.co.in>
• [modeller_usage] version 6 and 7 scripts 2005/03/16
  • From: "Paula R. Kuser Falcão" <paula AT cbi.cnptia.embrapa.br>
• Re: [modeller_usage] version 6 and 7 scripts 2005/03/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] how can i apply 'rsr' file for optimisation of my model 2005/03/16
  • From: "apurba kumar samal" <asamal_bi03 AT iiita.ac.in>
• [modeller_usage] USING OF RESTRAIN FILE 'RSR' FOR OPTIMISATION OF MODEL 2005/03/16
  • From: "apurba kumar samal" <asamal_bi03 AT iiita.ac.in>
• [modeller_usage] Re: modeller_usage Digest, Vol 4, Issue 21 2005/03/17
  • From: "drugdesign" <drugdesign AT yandex.ru>
• [modeller_usage] Allocate error 494-reg 2005/03/17
  • From: Elavazhagan <elavv2003 AT gmail.com>
• Re: [modeller_usage] Allocate error 494-reg 2005/03/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] help 2005/03/18
  • From: arul prakasam <harul_pup AT yahoo.co.in>
• [modeller_usage] work help 2005/03/18
  • From: "randy garmon" <randy256 AT hotmail.com>
• [modeller_usage] regarding Interaction Energy... 2005/03/20
  • From: "Himanshu Grover" <hgrover_00 AT iiita.ac.in>
• Re: [modeller_usage] regarding Interaction Energy... 2005/03/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Problems modelling sections of sequence on different templates 2005/03/20
  • From: pitm0020 AT flinders.edu.au
• [modeller_usage] dear modeller 2005/03/23
  • From: arul prakasam <harul_pup AT yahoo.co.in>
• [modeller_usage] NOC (current version 1.5.2.10) a new, free program for protein structure model-building, visualization, validation and analysis ... 2005/03/24
  • From: "Chenmengen" <chenmengen AT noc.ibp.ac.cn>
• [modeller_usage] Problem with modeller7v7 2005/03/25
  • From: Magali Cottevieille <Magali.Cottevieille AT lmcp.jussieu.fr>
• Re: [modeller_usage] Problem with modeller7v7 2005/03/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] dear modeller 2005/03/27
  • From: arul prakasam <harul_pup AT yahoo.co.in>
• [modeller_usage] TYROSINE KINASE HOMOLOGY MODELLING 2005/03/29
  • From: "Obdulia Rabal" <mrabal AT iqs.es>
• [modeller_usage] request 2005/04/04
  • From: "selvaraj manikandan mani" <s_mumfans AT rediffmail.com>
• [modeller_usage] question re. Modeller6v2 (re. fold) 2005/04/04
  • From: Vicente Reyes <vreyes AT sdsc.edu>
• [modeller_usage] Same coordinates 2005/04/08
  • From: "Joanne Hanna" <J.F.Hanna AT warwick.ac.uk>
• [modeller_usage] (no subject) 2005/04/08
  • From: Michael Grabe <mgrabe AT itsa.ucsf.edu>
• [modeller_usage] problem! 2005/04/09
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] tutorial on mod7v7 2005/04/11
  • From: "Paula R. Kuser Falcão" <paula AT cbi.cnptia.embrapa.br>
• Re: [modeller_usage] tutorial on mod7v7 2005/04/11
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] potassium ion 2005/04/13
  • From: fredrik <fredrik AT xray.bmc.uu.se>
• Re: [modeller_usage] potassium ion 2005/04/13
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] (no subject) 2005/04/13
  • From: Michael Grabe <mgrabe AT itsa.ucsf.edu>
• Re: [modeller_usage] potassium ion 2005/04/14
  • From: Fredrik <fredrik AT xray.bmc.uu.se>
• [modeller_usage] Modelling Hydrogen bond in helix 2005/04/17
  • From: Panapat Uawithya <the_nuk AT yahoo.com>
• [modeller_usage] joining of the same domain 2005/04/18
  • From: rathankar rao <rathankar AT yahoo.com>
• [modeller_usage] Modeller 8v0 release 2005/04/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] potassium ion 2005/04/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Python interpreter with Modeller 8v0 2005/04/22
  • From: gerald.quon AT utoronto.ca
• Re: [modeller_usage] Python interpreter with Modeller 8v0 2005/04/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] prb encountered, plz help 2005/04/24
  • From: rathankar rao <rathankar AT yahoo.com>
• Re: [modeller_usage] prb encountered, plz help 2005/04/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] pick.atoms 2005/04/25
  • From: jean-marc vuissoz <vuissozjm AT bluewin.ch>
• Re: [modeller_usage] pick.atoms 2005/04/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] An error with final_malign3d 2005/04/25
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• [modeller_usage] Re: An error with final_malign3d 2005/04/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Multidomain protein 2005/04/26
  • From: Ranjit Kumar <ranjit AT biochem.iisc.ernet.in>
• [modeller_usage] Loops 2005/04/26
  • From: John Penniston <john AT penniston.com>
• [modeller_usage] MODELER v6.3 script 2005/04/27
  • From: "O'MAHONY, BRIAN" <Bomahony AT imim.es>
• Re: [modeller_usage] MODELER v6.3 script 2005/04/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Loops 2005/04/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] model refinement and assessment 2005/04/28
  • From: "Stephen A. Smith" <sasmith1313 AT yahoo.com>
• Re: [modeller_usage] model refinement and assessment 2005/04/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] heteroatom 2005/05/08
  • From: arul prakasam <harul_pup AT yahoo.co.in>
• [modeller_usage] tetramers in symmetry 2005/05/09
  • From: "hchoe" <hchoe AT amc.seoul.kr>
• Re: [modeller_usage] tetramers in symmetry 2005/05/09
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] absolute position restraints 2005/05/10
  • From: "Frank Böckler" <fboeckler AT gmx.de>
• [modeller_usage] (no subject) 2005/05/11
  • From: "Manish Datt" <mdatt AT imtech.res.in>
• Re: [modeller_usage] (no subject) 2005/05/11
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] bus error 2005/05/11
  • From: <mdatt AT imtech.res.in>
• Re: [modeller_usage] bus error 2005/05/12
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] segmentation fault 2005/05/13
  • From: <mdatt AT imtech.res.in>
• [modeller_usage] modv8.0 on amd64 2005/05/13
  • From: Kim Branson <kim.branson AT gmail.com>
• RE: [modeller_usage] modv8.0 on amd64 2005/05/14
  • From: "Spero Manolatos" <sperom AT verizon.net>
• Re: [modeller_usage] modv8.0 on amd64 2005/05/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] forcing alignment of particular residues 2005/05/16
  • From: gerald.quon AT utoronto.ca
• Re: [modeller_usage] forcing alignment of particular residues 2005/05/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] segmentation fault 2005/05/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] absolute position restraints 2005/05/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] modv8.0 on amd64 2005/05/18
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] modv8.0 on amd64 2005/05/18
  • From: Kim Branson <kim.branson AT gmail.com>
• [modeller_usage] Spatial restraints as "flat bottom" potential 2005/05/19
  • From: Esben Jannik Bjerrum <esbenjannik AT rocketmail.com>
• Re: [modeller_usage] Spatial restraints as "flat bottom" potential 2005/05/19
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Problem about tutorial (Iterative Example) 2005/05/19
  • From: "Jianying (Julia) Ding" <jyding AT eden.rutgers.edu>
• [modeller_usage] (no subject) 2005/05/20
  • From: Michael Grabe <mgrabe AT itsa.ucsf.edu>
• Re: [modeller_usage] Problem about tutorial (Iterative Example) 2005/05/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] multiple templates 2005/05/21
  • From: Swagatam Ray <swagatam AT sgpgi.ac.in>
• [modeller_usage] model8v0 2005/05/24
  • From: bu weiming <weimbu AT yahoo.com>
• Re: [modeller_usage] model8v0 2005/05/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] dihedral restraints 2005/05/24
  • From: Judy Barnett-Norris <judy_norris AT earthlink.net>
• [modeller_usage] heme moiety of CYP450 2005/05/25
  • From: "O'MAHONY, BRIAN" <Bomahony AT imim.es>
• [modeller_usage] modeller 8v0 on Centos4 (aka RHEL 4) 2005/05/27
  • From: Ezequiel H Panepucci <zac AT pasteur.fr>
• Re: [modeller_usage] modeller 8v0 on Centos4 (aka RHEL 4) 2005/05/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] signif_cutoff 2005/05/27
  • From: Jean-Marc Vuissoz <vuissozjm AT bluewin.ch>
• [modeller_usage] problem with modeller 2005/05/30
  • From: Maria.Teresa.Azzollini AT roma1.infn.it
• Re: [modeller_usage] heme moiety of CYP450 2005/05/30
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem with modeller 2005/05/30
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] dihedral restraints 2005/05/30
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] modeling a complex 2005/06/03
  • From: Edoardo Saccenti <saccenti AT cerm.unifi.it>
• [modeller_usage] Clustering 2005/06/04
  • From: John Penniston <john AT penniston.com>
• [modeller_usage] Glycosylation on Asn 2005/06/05
  • From: "John Simms" <JXS818 AT bham.ac.uk>
• Re: [modeller_usage] Glycosylation on Asn 2005/06/06
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Python command 2005/06/07
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] Python command 2005/06/07
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Modelling a nucleic acid ligand present in the PDB file 2005/06/08
  • From: Charlotte HABEGGER-POLOMAT <spationaute AT yahoo.fr>
• [modeller_usage] array too small 2005/06/08
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] array too small 2005/06/08
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] array too small 2005/06/10
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] array too small 2005/06/10
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] problems with modeller 2005/06/16
  • From: limongelli AT unina.it
• [modeller_usage] Pick Restraints 2005/06/16
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] Pick Restraints 2005/06/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] not generating pdb files 2005/06/16
  • From: gerald.quon AT utoronto.ca
• [modeller_usage] Modeller 8v1 release 2005/06/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] not generating pdb files 2005/06/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Modeling DNA 2005/06/22
  • From: Lucas Bleicher <lbleicher AT yahoo.com>
• Re: [modeller_usage] Modeller 8v1 release 2005/06/22
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• Re: [modeller_usage] Modeller 8v1 release 2005/06/22
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• [modeller_usage] N-terminal acetylation via 'automodel?' ? 2005/06/23
  • From: "Niels Johan Christensen" <s991418 AT student.dtu.dk>
• [modeller_usage] disulfide bonds 2005/06/23
  • From: Dmitry Osolodkin <dmitry_o AT org.chem.msu.su>
• Re: [modeller_usage] Modeling DNA 2005/06/23
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• [modeller_usage] Incorrect Topology library? 2005/06/23
  • From: "Jeff Bush" <jbush AT chemmail.chem.fsu.edu>
• [modeller_usage] Homology model at specific pH 2005/06/23
  • From: Panapat Uawithya <the_nuk AT yahoo.com>
• Re: [modeller_usage] N-terminal acetylation via 'automodel?' ? 2005/06/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: your message in Modeller user list. 2005/06/24
  • From: Ezequiel H Panepucci <zac AT pasteur.fr>
• [modeller_usage] Terminal patching (acetylation/amidation) in Modeller 7.7 2005/06/24
  • From: "Niels Johan Christensen" <s991418 AT student.dtu.dk>
• Re: [modeller_usage] Terminal patching (acetylation/amidation) in Modeller 7.7 2005/06/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Incorrect Topology library? 2005/06/24
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] violation of restraints 2005/06/24
  • From: "Marsita M" <marsitam AT hotmail.com>
• [modeller_usage] problem! 2005/06/25
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• Re: [modeller_usage] violation of restraints 2005/06/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem! 2005/06/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] problem! 2005/06/26
  • From: vivek sharma <vivek.sharma AT helsinki.fi>
• [modeller_usage] no alignment 2005/06/26
  • From: Arnout Voet <Arnout.Voet AT fys.kuleuven.be>
• Re: [modeller_usage] no alignment 2005/06/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] NOC 2.0 released 2005/06/27
  • From: "Chenmengen" <chenmengen AT noc.ibp.ac.cn>
• Re: [modeller_usage] Terminal patching (acetylation/amidation) in Modeller 7.7 2005/06/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Some theoretical questions 2005/06/30
  • From: Dmitry Osolodkin <divanych AT rambler.ru>
• Re: [modeller_usage] Some theoretical questions 2005/06/30
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] adding loops while retaining template structure 2005/07/06
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• [modeller_usage] alignment file? 2005/07/06
  • From: Rozana Othman <rozanaothman AT um.edu.my>
• Re: [modeller_usage] alignment file? 2005/07/07
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] determination of symmetry 2005/07/09
  • From: rathankar rao <rathankar AT yahoo.com>
• [modeller_usage] mutant protein 2005/07/11
  • From: "silefra\@libero\.it" <silefra AT libero.it>
• Re: [modeller_usage] determination of symmetry 2005/07/11
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Modelling Molybdenum atom 2005/07/12
  • From: belal najjar <belalnajjar AT yahoo.com>
• Re: [modeller_usage] Modelling Molybdenum atom 2005/07/12
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] allhydrogen model and nselat error 2005/07/12
  • From: Starr Hazard <hazards AT musc.edu>
• [modeller_usage] Modeller 8v1 on x86_64 2005/07/12
  • From: Jarrod Smith <jsmith AT structbio.vanderbilt.edu>
• Re: [modeller_usage] allhydrogen model and nselat error 2005/07/13
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Modeller 8v1 on x86_64 2005/07/13
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] allhydrogen model and nselat error 2005/07/14
  • From: Starr Hazard <hazards AT musc.edu>
• [modeller_usage] mod8v1: command not found 2005/07/14
  • From: Bo Yang <n62star AT yahoo.com>
• Re: [modeller_usage] mod8v1: command not found 2005/07/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Newbie question : restraining secondary structure 2005/07/17
  • From: Parantu Shah <shah AT embl-heidelberg.de>
• Re: [modeller_usage] Newbie question : restraining secondary structure 2005/07/17
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: Newbie question : restraining secondary structure 2005/07/17
  • From: "Frederico Arnoldi" <fredgca AT hotmail.com>
• [modeller_usage] Restraining structure to Alpha 2005/07/20
  • From: John Penniston <john AT penniston.com>
• [modeller_usage] Correction- Restraining structure to Alpha 2005/07/20
  • From: John Penniston <john AT penniston.com>
• Re: [modeller_usage] Restraining structure to Alpha 2005/07/20
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] restraint violations files 2005/07/25
  • From: "Maria Turano" <mturano AT foodsci.unibo.it>
• [modeller_usage] modelling multiple loops 2005/07/26
  • From: "David L. Bostick" <dbostick AT physics.unc.edu>
• Re: [modeller_usage] modelling multiple loops 2005/07/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] modelling multiple loops 2005/07/27
  • From: "David L. Bostick" <dbostick AT physics.unc.edu>
• Re: [modeller_usage] modelling multiple loops 2005/07/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Hydrophobic restraints question 2005/07/29
  • From: <qiuyan_wang AT email.jlu.edu.cn>
• [modeller_usage] loop modelling 2005/08/04
  • From: Judy Barnett-Norris <judy_norris AT earthlink.net>
• Re: [modeller_usage] loop modelling 2005/08/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Modeller 8 forrtl severe 157 2005/08/04
  • From: Rodrigo Reston <rsreston AT gmail.com>
• Re: [modeller_usage] Modeller 8 forrtl severe 157 2005/08/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Error: Unable to open alignment file 2005/08/08
  • From: "Amin Momin" <gtg269c AT mail.gatech.edu>
• Re: [modeller_usage] Hydrophobic restraints question 2005/08/08
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] modeller usage 2005/08/09
  • From: Guido Leoni <guido.leoni AT gmail.com>
• [modeller_usage] crsplin_223E> Internal error: array too small: MAXSPL current maximum, current need: 400 420. 2005/08/23
  • From: Guido Leoni <guido.leoni AT gmail.com>
• [modeller_usage] 2005/08/26
  • From: sankari thirumal <sankari_thirumal AT yahoo.com>
• [modeller_usage] template pdb file has no header 2005/08/26
  • From: Akansha Saxena <asaxena17 AT yahoo.com>
• Re: [modeller_usage] template pdb file has no header 2005/08/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] crsplin_223E> Internal error: array too small: MAXSPL current maximum, current need: 400 420. 2005/08/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] profile files 2005/09/01
  • From: "Jason M Walraven" <j0walr01 AT louisville.edu>
• [modeller_usage] Internal error: array too small 2005/09/01
  • From: "hchoe" <hchoe AT amc.seoul.kr>
• Re: [modeller_usage] Internal error: array too small 2005/09/01
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Tutorial for beginners? 2005/09/05
  • From: Antonio Arroyo Luque <aarrluq AT upo.es>
• Re: [modeller_usage] Tutorial for beginners? 2005/09/05
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Tutorial for beginners? 2005/09/06
  • From: Karsten Suhre <karsten.suhre AT igs.cnrs-mrs.fr>
• [modeller_usage] Nucleic acid-protein complexe 2005/09/07
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• [modeller_usage] What I'm doing wrong? 2005/09/08
  • From: Antonio Arroyo Luque <aarrluq AT upo.es>
• Re: [modeller_usage] What I'm doing wrong? 2005/09/08
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• [modeller_usage] Re: modeller_usage Digest, Vol 4, Issue 75 2005/09/08
  • From: rathankar rao <rathankar AT yahoo.com>
• [modeller_usage] difficulty in modelllllling a chimeric protein, plz help 2005/09/09
  • From: rathankar rao <rathankar AT yahoo.com>
• [modeller_usage] structure not read in 2005/09/12
  • From: sankari thirumal <sankari_thirumal AT yahoo.com>
• [modeller_usage] Building tetramers 2005/09/12
  • From: Cesar Luis Avila <avila_cesar79 AT yahoo.com.ar>
• [modeller_usage] structure not read in 2005/09/13
  • From: sankari thirumal <sankari_thirumal AT yahoo.com>
• [modeller_usage] question about basic modelling 2005/09/14
  • From: Mehmet Serkan Apaydin <apaydin AT cs.dartmouth.edu>
• Re: [modeller_usage] question about basic modelling 2005/09/14
  • From: Eric Bennett <ericb AT pobox.com>
• [modeller_usage] Error on Alpha Unix 2005/09/14
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• Re: [modeller_usage] Error on Alpha Unix 2005/09/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Error on Alpha Unix 2005/09/15
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• [modeller_usage] Repeating basic tutorial with my protein - stuck at malign3d step 2005/09/16
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• [modeller_usage] backbone trace and sidechains 2005/09/16
  • From: Mehmet Serkan Apaydin <apaydin AT cs.dartmouth.edu>
• [modeller_usage] sequence alignment of pdb file with missing residues 2005/09/19
  • From: Andy Arvai <arvai AT scripps.edu>
• [modeller_usage] Problems with cis proline 2005/09/21
  • From: Eva María Priego <eva_priego AT hotmail.com>
• Re: [modeller_usage] sequence alignment of pdb file with missing residues] 2005/09/21
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• Re: [modeller_usage] Repeating basic tutorial with my protein - stuck at malign3d step 2005/09/21
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• Re: [modeller_usage] Problems with cis proline 2005/09/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] problem in modelling 2005/09/22
  • From: rathankar rao <rathankar AT yahoo.com>
• Re: [modeller_usage] sequence alignment of pdb file with missing residues] 2005/09/22
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• Re: [modeller_usage] problem in modelling 2005/09/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Repeating basic tutorial with my protein - stuck at malign3d step 2005/09/22
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Converting (old) top script to (new) python ones 2005/09/23
  • From: Eric Hajjar <Eric.Hajjar AT bccs.uib.no>
• Re: [modeller_usage] Converting (old) top script to (new) python ones 2005/09/23
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Problems with mod8v1 2005/09/25
  • From: "Elza Helena Andrade Barbosa" <elza AT compbio.ludwig.org.br>
• Re: [modeller_usage] Problems with mod8v1 2005/09/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Hi 2005/09/26
  • From: "zhurx" <zhurx AT mail.sioc.ac.cn>
• [modeller_usage] Hi 2005/09/26
  • From: "zhurx" <zhurx AT mail.sioc.ac.cn>
• Re: [modeller_usage] Hi 2005/09/26
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• [modeller_usage] symmetry in automodel 2005/09/26
  • From: Gordon Wells <gordon.wells AT gmail.com>
• Re: [modeller_usage] Hi 2005/09/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Problems with mod8v1 2005/09/26
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Question 2005/09/27
  • From: asif.iqbal AT iccs.edu
• [modeller_usage] Python Modeller Script 2005/09/27
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• Re: [modeller_usage] Python Modeller Script 2005/09/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] symmetry in automodel 2005/09/27
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Fwd: [modeller_usage] Python Modeller Script 2005/09/30
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• [modeller_usage] modeling of transmembrane proteins 2005/10/03
  • From: Akansha Saxena <asaxena17 AT yahoo.com>
• [modeller_usage] Modelling nucleic acids 2005/10/04
  • From: nisha AT ncbs.res.in
• [modeller_usage] modelling of complexes 2005/10/04
  • From: Arnout Voet <Arnout.Voet AT fys.kuleuven.be>
• Re: [modeller_usage] Modelling nucleic acids 2005/10/04
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• Re: [modeller_usage] modeling of transmembrane proteins 2005/10/04
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Modelling nucleic acids 2005/10/05
  • From: nisha AT ncbs.res.in
• [modeller_usage] DOPE score 2005/10/05
  • From: Leyla Celik <lc AT chem.au.dk>
• Re: [modeller_usage] DOPE score 2005/10/05
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] No optimization 2005/10/05
  • From: mathieu coincon <mathieu.coincon AT umontreal.ca>
• Re: [modeller_usage] No optimization 2005/10/05
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• [modeller_usage] Re: modeller_usage Digest, Vol 4, Issue 90 2005/10/05
  • From: "Prabhakar. G." <prabha.ganesan AT gmail.com>
• Re: [modeller_usage] No optimization 2005/10/06
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] No optimization 2005/10/06
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• [modeller_usage] Re: plotting with GNU 2005/10/07
  • From: "Prabhakar. G." <prabha.ganesan AT gmail.com>
• [modeller_usage] how to create .ali file 2005/10/10
  • From: sankari thirumal <sankari_thirumal AT yahoo.com>
• [modeller_usage] File not found 2005/10/10
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• [modeller_usage] (sans objet) 2005/10/10
  • From: "Riadh HAMMAMI" <riadh.hammami AT fst.rnu.tn>
• [modeller_usage] Re: 2005/10/10
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• Re: [modeller_usage] Re: 2005/10/10
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Re: 2005/10/10
  • From: Ricardo Nicoluci <nicoluci AT gmail.com>
• [modeller_usage] model-segment.py problem 2005/10/11
  • From: Guido Leoni <guido.leoni AT gmail.com>
• [modeller_usage] (sans objet) 2005/10/11
  • From: "Riadh HAMMAMI" <riadh.hammami AT fst.rnu.tn>
• [modeller_usage] RE:model-segment.py 2005/10/11
  • From: "Riadh HAMMAMI" <riadh.hammami AT fst.rnu.tn>
• Re: [modeller_usage] model-segment.py problem 2005/10/11
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] howto reverse polarity 2005/10/13
  • From: "Peter C. Lai" <sirmoo AT cowbert.2y.net>
• RE: [modeller_usage] howto reverse polarity 2005/10/13
  • From: Roberto Sanchez <roberto.sanchez AT mssm.edu>
• [modeller_usage] PSC WORKSHOP: COMPUTATIONAL BIOPHYSICS WORKSHOP 2005/10/14
  • From: Troy Wymore <wymore AT psc.edu>
• [modeller_usage] error when trying to set MDT_LIB_FILE and BIN_LIB_FILE 2005/10/19
  • From: Daniel Rigden <drigden AT liverpool.ac.uk>
• Re: [modeller_usage] error when trying to set MDT_LIB_FILE and BIN_LIB_FILE 2005/10/19
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] multiple protein conformations 2005/10/20
  • From: jf163201 AT ohio.edu
• [modeller_usage] chain 2005/10/22
  • From: "PARVINI" <PARVINI AT modares.ac.ir>
• [modeller_usage] problem with modelling a non-template helix 2005/10/25
  • From: "Renée Vancraenenbroeck" <renee.vancraenenbroeck AT student.kuleuven.be>
• Re: [modeller_usage] problem with modelling a non-template helix 2005/10/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] constrain template secondary structure in energy minimization/loop building 2005/10/27
  • From: Frank Peelman <Frank.Peelman AT UGent.be>
• [modeller_usage] model assessment method 2005/11/01
  • From: "서주현"<seojoohyun AT nate.com>
• [modeller_usage] Question running script on cluster 2005/11/01
  • From: zkatsim AT nimr.mrc.ac.uk
• Re: [modeller_usage] model assessment method 2005/11/01
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Question running script on cluster 2005/11/01
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: model assessment method 2005/11/01
  • From: Mensur Dlakic <mdlakic AT montana.edu>
• Re: [modeller_usage] Re: model assessment method 2005/11/01
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] topology for nicotine 2005/11/01
  • From: Hai-long Wang <hwang AT mayo.edu>
• [modeller_usage] Refinement of part of model 2005/11/02
  • From: "Matt wagner" <mattwagner AT hotmail.com>
• [modeller_usage] add new residue type 2005/11/02
  • From: Hai-long Wang <hwang AT mayo.edu>
• Re: [modeller_usage] Refinement of part of model 2005/11/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] error 2005/11/03
  • From: sankari thirumal <sankari_thirumal AT yahoo.com>
• [modeller_usage] Modeling multiple domains 2005/11/03
  • From: randalla AT uci.edu
• [modeller_usage] Builing models with big distances 2005/11/09
  • From: Fabio Passetti <fabio.passetti AT incor.usp.br>
• [modeller_usage] Problems w/ rand_seed for Mod8v1 2005/11/16
  • From: zkatsim AT nimr.mrc.ac.uk
• Re: [modeller_usage] Problems w/ rand_seed for Mod8v1 2005/11/16
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] modeller 2005/11/18
  • From: "Renée Vancraenenbroeck" <renee.vancraenenbroeck AT student.kuleuven.be>
• [modeller_usage] The assessment of protein model with the function in modeller 8.1 2005/11/21
  • From: "서주현"<seojoohyun AT nate.com>
• [modeller_usage] import site failed error 2005/11/21
  • From: "S.Sundar Raman" <sundar02 AT gmail.com>
• [modeller_usage] Incorrect Number or residues/Starting position 2005/11/21
  • From: "Kevin Galens \(RIT Student\)" <kgg2775 AT rit.edu>
• Re: [modeller_usage] import site failed error 2005/11/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] The assessment of protein model with the function in modeller 8.1 2005/11/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Incorrect Number or residues/Starting position 2005/11/21
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Loop redefine on tetramer 2005/11/24
  • From: bmbbl AT leeds.ac.uk
• [modeller_usage] Dope Gnu Plot 2005/11/25
  • From: Mattias de Hollander <mdehollander AT gmail.com>
• Re: [modeller_usage] Loop redefine on tetramer 2005/11/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Dope Gnu Plot 2005/11/25
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] max number of optima in resdih.lib 2005/11/29
  • From: Luis Gracia <lug2002 AT med.cornell.edu>
• [modeller_usage] How many models to generate? 2005/11/30
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• [modeller_usage] Occupancy problem ? 2005/12/02
  • From: "Nicolas" <bischler AT eie.gr>
• [modeller_usage] restrain beta strands and plates 2005/12/02
  • From: Arnout Voet <Arnout.Voet AT fys.kuleuven.be>
• [modeller_usage] RE: How many models to generate? 2005/12/02
  • From: "Frederico Arnoldi" <fredgca AT hotmail.com>
• Re: [modeller_usage] RE: How many models to generate? 2005/12/02
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• Re: [modeller_usage] max number of optima in resdih.lib 2005/12/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] Occupancy problem ? 2005/12/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] restrain beta strands and plates 2005/12/02
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] How to choose the best model? 2005/12/02
  • From: carromeu AT usp.br
• [modeller_usage] Re: modeller_usage Digest, Vol 4, Issue 107 2005/12/02
  • From: rathankar rao <rathankar AT yahoo.com>
• Re: [modeller_usage] How to choose the best model? 2005/12/03
  • From: "นายจิตระยุทธ์ จิตอ่อนน้อม" <JManU AT chaiyo.com>
• [modeller_usage] The large gap on sequence is a big problem 2005/12/03
  • From: "นายจิตระยุทธ์ จิตอ่อนน้อม" <JManU AT chaiyo.com>
• [modeller_usage] dynamic memory allocation failed 2005/12/04
  • From: Ilya Shlyakhter <ilya_shl AT MIT.EDU>
• Re: [modeller_usage] dynamic memory allocation failed 2005/12/05
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] loops iterations and various DOPE scores 2005/12/06
  • From: Starr Hazard <hazards AT musc.edu>
• Re: [modeller_usage] loops iterations and various DOPE scores 2005/12/06
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] General Homolgy question 2005/12/07
  • From: "Yogesh Sabnis" <yogesh AT orgfarm.uu.se>
• Re: [modeller_usage] The large gap on sequence is a big problem 2005/12/07
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• Re: [modeller_usage] How to choose the best model? 2005/12/07
  • From: Charlotte Habegger-Polomat <chpoloma AT rsvs.ulaval.ca>
• [modeller_usage] How to include alignment to model_symmetry_define() 2005/12/07
  • From: bmbbl AT leeds.ac.uk
• Re: [modeller_usage] How to include alignment to model_symmetry_define() 2005/12/07
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] How to choose the best model? 2005/12/07
  • From: carromeu AT usp.br
• Re: [modeller_usage] loops iterations and various DOPE scores 2005/12/08
  • From: Starr Hazard <hazards AT musc.edu>
• [modeller_usage] file name problem 2005/12/08
  • From: Starr Hazard <hazards AT musc.edu>
• Re: [modeller_usage] file name problem 2005/12/08
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: To Model missing domains in the content of the rest 2005/12/08
  • From: Shirley Li <li19104 AT yahoo.com>
• [modeller_usage] To use separate templates for different region of a protein 2005/12/08
  • From: Shirley Li <li19104 AT yahoo.com>
• Re: [modeller_usage] Re: To Model missing domains in the content of the rest 2005/12/08
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] loops iterations and various DOPE scores 2005/12/08
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Re: modeller_usage Digest, Vol 4, Issue 113 2005/12/09
  • From: rathankar rao <rathankar AT yahoo.com>
• [modeller_usage] beta-sheets and alpha-helixes 2005/12/13
  • From: "Matthias Negri" <thias AT scfarm.unibo.it>
• [modeller_usage] is LOOP threading a common result? 2005/12/14
  • From: Starr Hazard <hazards AT musc.edu>
• Re: [modeller_usage] beta-sheets and alpha-helixes 2005/12/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• Re: [modeller_usage] is LOOP threading a common result? 2005/12/14
  • From: Modeller Caretaker <modeller-care@ucsf.edu>
• [modeller_usage] Loop model selection 2005/12/15
  • From: bmbbl AT leeds.ac.uk
• [modeller_usage] DOPE Score 2005/12/16
  • From: Mattias de Hollander <mdehollander AT gmail.com>
• [modeller_usage] modelling loops with nmr restraints 2005/12/16
  • From: cubellis AT unina.it
• [modeller_usage] (no subject) 2005/12/18
  • From: "mahboobeh zarrabi" <zarrabi AT modares.ac.ir>
• [modeller_usage] what i am doing wrong? 2005/12/24
  • From: Anna Kaczynska <ak471 AT bard.edu>
• [modeller_usage] out_put directory 2005/12/27
  • From: doppelt olivia <olivia_doppelt AT yahoo.fr>
• Re: [modeller_usage] out_put directory 2005/12/28
  • From: Modeller Caretaker <modeller-care@ucsf.edu>