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Re: [modeller_usage] modeller ga341 score

jo hanna wrote:
After having built my models, i have decided to assess them using the ga341 score.

the ouput of this script for two different models is:

GA341 score              :     1.000000

GA341 score              :     1.000000

how do i interpret these outputs? should both scores be 1?

GA341 is not sufficiently sensitive to distinguish between two 'very good' models. Any good model will give a score very close to 1 (e.g. running GA341 on most PDB structures will give a 1.0 score). You should use it only to discard 'bad' models (e.g. those with score less than 0.6). DOPE may be more sensitive in your case.

	Ben Webb, Modeller Caretaker
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage