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Re: [modeller_usage] Help needed concerning the alignment file

doppelt olivia wrote:

I've been trying to use Modeller on an alignement file
obtained from a clustalw use.
I have the pdb file in the same repertory.

I used a script, that i found in the examples files of
Modeller.

When I try to use Modeller,
the following error is made : rdpir___648E> Alignment sequence not found in PDB 
file:        1  ./1tu7.pdb

1tu7 contains two chains: 'A' and 'B'. Your alignment does not specify a 
chain ID; give either A or B. See 
http://salilab.org/modeller/manual/node175.html

	Ben Webb, Modeller Caretaker
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