Robert Selwyne wrote:
I am surprised to see the error -structural information is not available. It means the PDB i'ds are missing in the sequence database?. But those PDB id.s are taken from my buildtarget.log. How can i execute compare target.log? Now I have downloaded the necessary PDB files manually, Could you tell which/where directory to paste these files with a detailed command list since i am beginner to modeller.
If you don't set atom_files_directory, Modeller will look in the current directory for PDB files.
Ben Webb, Modeller Caretaker -- http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage