[modeller_usage] [Fwd: Cannot generate the plot of DOPE?]

[Modeller Caretaker <modeller-care@ucsf.edu>]

-------- Original Message --------
Subject: 	Cannot generate the plot of DOPE?
Date: 	Wed, 9 May 2007 02:03:18 +0900
From: 	Ngo Duc Tri <ngoductri AT gmail.com>
To: 	modeller-care@ucsf.edu



Dear Modeller users,
I finished modelling my protein and doing the evaluation step. I run the
file evaluate_model.py to calculate the DOPE score of my model.
I got DOPE score  : -39521.605469 and there was no error in the log file.

I use this profile file to generate the DOPE plot using GNUPLOT but this
program show a strange line. Actually It just show the position of my
aminoacid but no DOPE score for each.

I run the GNUPLOT and used the command: plot ' myprotein.profile'

I want to ask you If it's the error of GNUPLOT or my profile file? And
how can i fix it to show the actual DOPE score for each residues.


Thank you very much for your comments,
Best regards,
TriNgo
Sungkyunkwan University