Subject: [modeller_usage] query about alignment type
From: "Bhavya Jindal" <>
Date: Thu, 1 Nov 2007 11:04:02 +0530 (IST)
Hi
I am a new modeller user. I built my initial model using a simple blast
alignment and other using secondary structure alignment using same
template and targets and i got different results. Now i am a bit confused
that which type of alignment should be used for modeling. Please somebody
help in clarifying my doubt.
Regards
Bhavya
--
Bhavya Jindal
Research Scholar
School of Biosciences and Bioengineering
Indian Institute of Technology Bombay
Mumbai
Maharashtra 400076