Re: [modeller_usage] how add sidechains

[Mensur Dlakic <>]

Modeller should be able to do this, but if your intent is to just add 
sidechains and not change backbone at all, I would suggest SCWRL:

http://dunbrack.fccc.edu/SCWRL3.php

Other useful servers:

http://bioserv.rpbs.jussieu.fr/cgi-bin/SCit
http://eudoxus.scs.uiuc.edu/r3.html
http://irecs.bioinf.mpi-inf.mpg.de/


At 03:45 AM 5/28/2008,  wrote:
> Hi,
> I have a problem with the model building. Specifically, I have the coordinates
> of the backbone and I want to add its sidechains but I can't find the
> appropriate script. If someone knows the name of the script, tell me.
> Thank you in advance,
> Maria.
> _______________________________________________
> modeller_usage mailing list
>
> https://salilab.org/mailman/listinfo/modeller_usage

==========================================================================
| Mensur Dlakic, PhD                | Tel: (406) 994-6576                |
| Department of Microbiology        | Fax: (406) 994-4926                |
| Montana State University          | Lab: (406) 994-6237                |
| 109 Lewis Hall, P.O. Box 173520   | http://myprofile.cos.com/mensur    |
| Bozeman, MT 59717-3520            | E-mail:         |
==========================================================================