I was jus modeling the structure of 1fdx protein , taking the target
5fd1 (all these files are already there) but after running the script it
closes all of a sudden in between and when modeling for the whole of the
template and target sequence .. its giving structure .. So can u tell me
where am i going wrong ??
Sorry, but that's not really enough information to answer your question.
What do you mean by "closes all of a sudden in between"? Most likely you
have an error in your script, which Python will report on the command
line as an exception. But it sounds like you are double-clicking on the
Python script (perhaps on a Windows machine?). You won't see any of the
script's output that way - you should run it from the command line, or
from a Python development environment such as IDLE.
If i am executing the script from the command line .. its not getting
executed ..