[modeller_usage] Regarding energy minimization in modeller
Subject: [modeller_usage] Regarding energy minimization in modeller
From: snoze pa <>
Date: Mon, 27 Jul 2009 11:32:05 -0500
I am using modeller to build some homology model. But I am unable to
find any script that can be used to minimize the structure. Is there
any script available in modeller that can be used to energy minimize
the modeled structure. I try to use the old script, model_energies.py
but it give me following error message
Traceback (most recent call last):
File "model_energies.py", line 41, in ?
TypeError: generate_topology() got an unexpected keyword argument 'sequence'
How modeller can be used to energy minimize a model structure. I am
using current version of modeller.
Thank you very much.