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Re: [modeller_usage] ERROR ALIGN_CODES



Leonardo Herrera wrote:
I have a problem when I am realising my model with multiple templates, in the step to align the alignment of pdb's versus my sequence I obtain the following problem…
...
_modeller.ModellerError: read_al_373E> Protein specified in ALIGN_CODES(i) was not found in the alignment file; ALIGN_CODES( 13) = giAAR00925
Your alignment file is not valid PIR format: see 
http://salilab.org/modeller/9v7/manual/node445.html for the correct 
format. Otherwise, your scripts look OK. If you still can't figure out 
the problem, please put your input files into an archive (e.g. tar.gz 
file or zip file) and send them to me, and I'll take a look.
	Ben Webb, Modeller Caretaker
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