Re: [modeller_usage] Regarding Salign

[Modeller Caretaker <modeller-care@salilab.org>]

On 1/10/11 9:12 PM, Ashish Runthala wrote:
> Will you please tell me how salign actually functions to compute
> "final max quality" produced for a considered set of templates.
The SALIGN quality score is the average of the structural overlap at 
cutoffs of 1, 2, 3 and 4 angstroms, similar to the GDT_TS score. See 
Protein Eng Des Sel 22, 569-574, 2009.
	Ben Webb, Modeller Caretaker
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