On 9/24/12 1:52 PM, Nanda Pandey wrote:
I am trying to do a simple modelling similar to the basic tutorial given in modeller website. I have converted my sequence to PIR format and have kept all files including the pdb database file in same directory but when i run the script build_profile.py, I am getting the following error : "cannot open file filename.ali: no such file or directory"
"filename.ali" needs to be in the same directory you're running the script in. Make sure you have named it correctly.
Ben Webb, Modeller Caretaker -- http://www.salilab.org/modeller/ Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage