Re: [modeller_usage] Build missing residues for multisubunit protein

[Kelly Tran <>]

Hi Ben,

The error I receive is:

---

  File "/Library/modeller-9.10/modlib/modeller/coordinates.py", line 298, in _indxres

    raise KeyError("No such residue: %s" % indx)

KeyError: 'No such residue: 1:B'

---

I separate the chains with '/' in my alignment file. 

Thank you,

Kelly

On Mon, Jul 29, 2013 at 2:48 PM, Modeller Caretaker <" target="_blank">> wrote:

On 07/29/2013 11:42 AM, Kelly Tran wrote:

Do you have suggestions on how to build missing residues for a
multisubunit protein while restricting non-missing residues from moving?

Sure, it's the same as for a single chain protein - the only difference is that you'd need to qualify each residue number with the chain it's in (e.g. residue_range('1:A', '1:A')). What problems did you run into?

        Ben Webb, Modeller Caretaker
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