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Re: [modeller_usage] constraints failed



On 10/14/13 3:19 AM, fantasticqhl wrote:
Could someone tell  me what kinds of reasons could result in restraints
failure? Thanks very much!

Modeller tries to satisfy all restraints. This includes both your restraints and the default restraints that are extracted from the alignment and forcefield. So generally a failure such as you describe is the result of a conflict - Modeller is unable to satisfy both your restraints and some other set of restraints at the same time.

	Ben Webb, Modeller Caretaker
--
             http://www.salilab.org/modeller/
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