[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [modeller_usage] Fwd: constraints failed



On 10/14/13 3:42 AM, fantasticqhl wrote:
Finally I solve this problem after I set the stdev as 0.005. I thought
that stdev means standard deviation
That's exactly what it means. The smaller the standard deviation of the 
probability distribution, the stronger the restraint. So by making the 
standard deviation smaller, you make your restraint stronger, so that it 
can overwhelm other restraints that it may be conflicting with.
	Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage