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Re: [modeller_usage] Fwd: Extract Chain ID

On 10/28/2013 12:01 PM, Amjad Farooq wrote:

For instance, if a PDB has 4 chains (say A, D, F, P) and I am interested
in extracting the chain ID of the second segment (D) that best aligns
with my query sequence, I do not believe you can extract that from PIR
alignment file, which only provides chain IDs of the first (A) and the
last chain (P).
No, but you can read in the corresponding PDB and extract the chains from that. 

	Ben Webb, Modeller Caretaker
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