[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [modeller_usage] Alternate sidechain positions

To: meginir urestal <meginir.urestal@gmail.com>, modeller_usage@salilab.org
Subject: Re: [modeller_usage] Alternate sidechain positions
From: Modeller Caretaker <modeller-care@salilab.org>
Date: Mon, 28 Apr 2014 16:17:02 -0700

On 4/28/14, 7:53 AM, meginir urestal wrote:

how does modeller handle alternate sidechain positions in a pdb file?

From http://salilab.org/modeller/9.13/manual/node175.html

"For PDB files with alternate locations (characters in column 17 of ATOMor HETATM records), MODELLER reads only the first alternate locationencountered for each residue."

	Ben Webb, Modeller Caretaker
--
modeller-care@salilab.org             http://www.salilab.org/modeller/
Modeller mail list: http://salilab.org/mailman/listinfo/modeller_usage

References:
- [modeller_usage] Alternate sidechain positions
  - From: meginir urestal <meginir.urestal@gmail.com>

Prev by Date: Re: [modeller_usage] How do you use MOULDER?
Next by Date: [modeller_usage] Should you use multiple pdb files of the same sequence when available for multiple template homology modeling?
Previous by thread: [modeller_usage] Alternate sidechain positions
Next by thread: [modeller_usage] Should you use multiple pdb files of the same sequence when available for multiple template homology modeling?
Index(es):
- Date
- Thread