[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

Re: [modeller_usage] Multimeric Protein Modelling

On 9/15/17 2:59 PM, Ryan Ehrlich wrote:
I'm running into issues when modelling a multimeric (2 chains) protein. When using the multi-chain modelling example seen in the online manual (see below) it throws an error because the monomers aren't the same length, per the special_restraints(). How can I resolve this issue?

If you're not modeling a homodimer, it doesn't make sense to enforce symmetry, so you can just use the regular automodel class - no need to subclass and set up symmetry restraints.

	Ben Webb, Modeller Caretaker
Modeller mail list: https://salilab.org/mailman/listinfo/modeller_usage