Subject: Re: [modeller_usage] Multimeric Protein Modelling
From: Modeller Caretaker <>
Date: Fri, 15 Sep 2017 15:34:14 -0700
On 9/15/17 2:59 PM, Ryan Ehrlich wrote:
I'm running into issues when modelling a multimeric (2 chains) protein.
When using the multi-chain modelling example seen in the online manual
(see below) it throws an error because the monomers aren't the same
length, per the special_restraints(). How can I resolve this issue?
If you're not modeling a homodimer, it doesn't make sense to enforce
symmetry, so you can just use the regular automodel class - no need to
subclass and set up symmetry restraints.