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Introduction
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ASGL, Ver 1.3.1 PostScript
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Contents
Contents
Index
User's Guide
Subsections
Introduction
What is A
SGL
?
Using A
SGL
with the T
OP
steering file
ASGL installation
Using A
SGL
A
SGL
commands
#EPSF -- produce encapsulated PostScript
SET STAMP_TEXT -- stamp the page
READ_TABLE -- read the Table array of data
WRITE_TABLE -- write the Table array of data
READ_DPLOT -- read the Density array of data
WRITE_DPLOT -- write the Density array of data
WORLD -- define the extent of your data
AXES2D -- draw coordinate axes, ticks, and labels
PLOT2D -- draw a 2D line or scatter plot
SPECTRUM -- draw a bar code plot
HIST2D -- draw a 2D histogram
DPLOT -- draw a density plot
CAPTION -- place a caption next to an axis
RESET_CAPTIONS -- reset caption positioning
LINE2D -- draw a line
SET_RECORD -- sets RECORD to selected Table elements
PRINT -- print a text
NEW_PAGE -- start a new page
ARROW -- draw an arrow
POSTSCRIPT -- write a PostScript command
TRANSFORM -- transform Table or Density array data
RESET -- reset T
OP
GET_BARS -- calculate histogram bars
GET_DENSITY -- calculate Density plot data
SHUFFLE_DPLOT -- re-organize the Density plot data
DENSITY_TO_XY -- Density to XY data
XY_TO_DENSITY -- XY to density data
LEGEND -- draw a legend
RESET_LEGEND -- reset legend positioning
PLOT_ERROR_BARS -- draw error bars
SELECT_DATA -- select some rows in Table array
SWITCH_PS -- open a new PostScript file
FIT -- non-linear least-squares fit of data
FIT2 -- non-linear least-squares fit of data
SMOOTH_TABLE -- smooth the Table array data
READ_PDB -- read a Brookhaven molecular structure
WRITE_PDB -- write a Brookhaven molecular structure
MAKE_BONDS -- make a list of bonds
LABEL_ATOMS -- label the selected atoms
DEFAULT_ATOM_COLOR -- color all the atoms
SELECT_ATOMS -- select atoms in a molecule
BALL_STICK -- draw a molecule
ROTATE_MOL -- rotate the molecule using rotation matrix
ROTATE_MOL_AXIS -- rotate the molecule around the axis
TRANSLATE_MOL -- translate the molecule
CENTER_MOL -- center the molecule
A
SGL
examples
Scatter plots --
scatter.top
Labelled scatter plots --
labls.top
Error bars --
error.top
Mixed style plots --
mixed.top
Histograms from raw data --
bars.top
Multiple histograms --
mhist.top
Y axis on the right --
alty.top
Stacked histograms --
stkhist.top
Spectra plots --
spectrum.top
Density plots --
dplot.top
Least-squares fitting --
dplot.top
Protein C
plot --
3rp2.top
Protein heavy atom plot --
1fdx.top
Protein H atom plot --
hydr.top
Protein CB-CB contacts --
cbeta.top
Lattice model plot --
lattice.top
ASGL fonts, symbols, line types and standard plot positions
T
OP
language
The source file
T
OP
Commands
DEFINE_INTEGER -- define integer variables
DEFINE_LOGICAL -- define logical variables
DEFINE_REAL -- define real variables
DEFINE_STRING -- define string variables
SET -- set variable
OPERATE -- perform mathematic operation
STRING_OPERATE -- perform string operation
RESET -- reset T
OP
OPEN -- open input file
WRITE -- write T
OP
objects
READ -- read record from input file
CLOSE -- close an input file
WRITE_TOP -- write the T
OP
program
SYSTEM -- execute system command
INQUIRE -- check if file exists
GO_TO -- jump to label
LABEL -- place jump label
INCLUDE -- include T
OP
file
CALL -- call T
OP
subroutine
SUBROUTINE -- define T
OP
subroutine
RETURN -- return from T
OP
subroutine
END_SUBROUTINE -- end definition of T
OP
subroutine
DO -- DO loop
IF -- conditional statement for numbers
STRING_IF -- conditional statement for strings
STOP -- exit T
OP
Predefined T
OP
variables
top.ini
file
Ben Webb 2003-10-09
plot -- 3rp2.top