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* [http://mozart.bio.neu.edu/friend/ Friend], an integrated multiple structure visualization and multiple sequence alignment application (see "extended capabilities") | * [http://mozart.bio.neu.edu/friend/ Friend], an integrated multiple structure visualization and multiple sequence alignment application (see "extended capabilities") | ||
* [http://glinka.bio.neu.edu/StSNP/ Structure SNP], which compares structural nsSNP distributions in many proteins or protein complexes, and allows mapping onto protein structures by comparative modeling with Modeller | * [http://glinka.bio.neu.edu/StSNP/ Structure SNP], which compares structural nsSNP distributions in many proteins or protein complexes, and allows mapping onto protein structures by comparative modeling with Modeller | ||
* [http://www.fiserlab.org/servers/M4T M4T], Multiple Mapping Method with Multiple Templates: Comparative protein structure modeling by combining of multiple templates and optimizing sequence-to-structure alignments | |||
* [http://www.fiserlab.org/servers/mmm MMM], Multiple Mapping Method: a novel approach to the sequence-to-structure alignment problem in comparative protein structure modeling | |||
=== Frameworks and other interfaces === | === Frameworks and other interfaces === | ||
* [http://biskit.pasteur.fr/ Biskit], a modular, object-oriented Python library for structural bioinformatics research. | * [http://biskit.pasteur.fr/ Biskit], a modular, object-oriented Python library for structural bioinformatics research. | ||
Revision as of 13:48, 1 May 2008
Links to other resources and people using Modeller
(!) Please edit this page to link to your own resources or interfaces using Modeller, so that Modeller users can easily find them!
Graphical and web interfaces
- MINT, a graphical interface to simple Modeller comparative modeling functions
Usage of Modeller in other systems
- Friend, an integrated multiple structure visualization and multiple sequence alignment application (see "extended capabilities")
- Structure SNP, which compares structural nsSNP distributions in many proteins or protein complexes, and allows mapping onto protein structures by comparative modeling with Modeller
- M4T, Multiple Mapping Method with Multiple Templates: Comparative protein structure modeling by combining of multiple templates and optimizing sequence-to-structure alignments
- MMM, Multiple Mapping Method: a novel approach to the sequence-to-structure alignment problem in comparative protein structure modeling
Frameworks and other interfaces
- Biskit, a modular, object-oriented Python library for structural bioinformatics research.