Sorry, it is working fine. I did a mistake in assigning setenv LIBS...
.../BVB
On Sun, 20 Jan 2002, Boojala Reddy wrote:
>
> Hi..
>
> I am getting following when I first tried the tutoraial:
>
> ==============
> palomar (117) % mod6v0 model-default
>
> sys-2 : UNRECOVERABLE error on system request
> No such file or directory
>
> Encountered during an OPEN of unit 11
> Fortran unit 11 is not connected
> IOT Trap
> /projects/nbcr/breddy/SOFTWARE/MODELLER/MODELLER6v0/modeller6v0/bin/mod6v0[41]:
> 495462 Abort
> ==================
>
> Please help:
>
> my modified tops file where I only changed the atom file directory
>
> --------------
> # Homology modelling by the MODELLER TOP routine 'model'.
>
> INCLUDE # Include the predefined TOP routines
>
> SET OUTPUT_CONTROL = 1 1 1 1 1 # uncomment to produce a large log
> file
> SET ALNFILE = 'alignment.ali' # alignment filename
> SET KNOWNS = '5fd1' # codes of the templates
> SET SEQUENCE = '1fdx' # code of the target
> SET ATOM_FILES_DIRECTORY =
> '/projects/nbcr/breddy/SOFTWARE/MODELLER/MODELLER6v0/TEST' # directories
> for input atom files
> SET STARTING_MODEL= 1 # index of the first model
> SET ENDING_MODEL = 1 # index of the last model
> # (determines how many models to
> calculate)
>
> CALL ROUTINE = 'model' # do homology modelling
> -----------
>