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Re: starting problem-working fine




Sorry, it is working fine. I did a mistake in assigning setenv LIBS...

.../BVB


On Sun, 20 Jan 2002, Boojala Reddy wrote:

>
> Hi..
>
> I am getting following when I first tried the tutoraial:
>
> ==============
> palomar (117) % mod6v0 model-default
>
> sys-2 : UNRECOVERABLE error on system request
>   No such file or directory
>
> Encountered during an OPEN of unit 11
> Fortran unit 11 is not connected
> IOT Trap
> /projects/nbcr/breddy/SOFTWARE/MODELLER/MODELLER6v0/modeller6v0/bin/mod6v0[41]:
> 495462 Abort
> ==================
>
> Please help:
>
> my modified tops file where I only changed the atom file directory
>
> --------------
> # Homology modelling by the MODELLER TOP routine 'model'.
>
> INCLUDE                             # Include the predefined TOP routines
>
> SET OUTPUT_CONTROL = 1 1 1 1 1      # uncomment to produce a large log
> file
> SET ALNFILE  = 'alignment.ali'      # alignment filename
> SET KNOWNS   = '5fd1'               # codes of the templates
> SET SEQUENCE = '1fdx'               # code of the target
> SET ATOM_FILES_DIRECTORY =
> '/projects/nbcr/breddy/SOFTWARE/MODELLER/MODELLER6v0/TEST'   # directories
> for input atom files
> SET STARTING_MODEL= 1               # index of the first model
> SET ENDING_MODEL  = 1               # index of the last model
>                                     # (determines how many models to
> calculate)
>
> CALL ROUTINE = 'model'              # do homology modelling
> -----------
>