Modeller_Usage Mailing List (by date)

Thread Index

GPCR 2002/01/02
- From: Dan Thomas Major <majord@mail.biu.ac.il>
(no subject) 2002/01/05
- From: Alexander Farley <afarley@mail.med.upenn.edu>
[Fwd: GPCR] 2002/01/07
- From: Dan Thomas Major <majord@mail.biu.ac.il>
GPCR 2002/01/07
- From: Dan Thomas Major <majord@mail.biu.ac.il>
Re: GPCR 2002/01/07
- From: Dan Thomas Major <majord@mail.biu.ac.il>
Question 2002/01/07
- From: Paolo Daniele <daniepao@yahoo.it>
RE: Question 2002/01/07
- From: "Andrej Sali" <sali@rockefeller.edu>
Re: Question 2002/01/07
- From: "Eric Feyfant" <EFeyfant@genetics.com>
MD refinement 2002/01/09
- From: Giulio Rastelli <giulio@caesar.unimo.it>
SUPPORT: Re: MD refinement 2002/01/09
- From: Andras Fiser <andras@viol.rockefeller.edu>
stepwise top 2002/01/10
- From: Dan Thomas Major <majord@mail.biu.ac.il>
RE: stepwise top 2002/01/10
- From: "Andrej Sali" <sali@rockefeller.edu>
RE: stepwise top 2002/01/10
- From: Michael Buck <mjbuck@unity.ncsu.edu>
Segmentation fault with modeller 6 2002/01/11
- From: Björn Wallner <bjorn@sbc.su.se>
chain breaks 2002/01/11
- From: "Christopher A. Wells" <wellsca@musc.edu>
ask again: disaster 2002/01/15
- From: "zhenyisong" <zhenyisong@graphics.ee.tsinghua.edu.cn>
Potential energy calculations with MODELLER 2002/01/16
- From: Francois Sampieri <sampieri.f@jean-roche.univ-mrs.fr>
RE: Potential energy calculations with MODELLER 2002/01/16
- From: "Andrej Sali" <sali@rockefeller.edu>
SUPPORTRe: chain breaks 2002/01/16
- From: Andras Fiser <andras@viol.rockefeller.edu>
Question about log files 2002/01/17
- From: Xavier Gallet <gallet@genodyssee.com>
Re: Question about log files 2002/01/17
- From: "T. .R. Dafforn" <td214@cam.ac.uk>
Re: Question about log files 2002/01/17
- From: Andras Fiser <andras@viol.rockefeller.edu>
select_loop_atoms 2002/01/17
- From: Obdulia Rabal <obdulia@edurne.iqs.es>
Re: Question about log files 2002/01/17
- From: "T. .R. Dafforn" <td214@cam.ac.uk>
starting problem 2002/01/20
- From: Boojala Reddy <breddy@sdsc.edu>
Re: starting problem-working fine 2002/01/20
- From: Boojala Reddy <breddy@sdsc.edu>
malign3D question 2002/01/21
- From: "Karen C. Ellis" <kklenk@umaryland.edu>
protein structure file (psf) 2002/01/21
- From: "Nitin Rathore" <rathore@cae.wisc.edu>
SEQUENCE_COMPARISON 2002/01/22
- From: Obdulia Rabal <obdulia@edurne.iqs.es>
RE: protein structure file (psf) 2002/01/22
- From: "Bozidar Jerkovic" <bozidar@salilab.org>
disulfides 2002/01/23
- From: Daniel John Rigden <daniel@cenargen.embrapa.br>
RE: disulfides 2002/01/23
- From: "Andrej Sali" <Sali@rockefeller.edu>
RE: disulfides 2002/01/23
- From: Daniel John Rigden <daniel@cenargen.embrapa.br>
RE: SS bridges 2002/01/24
- From: "Andrej Sali" <Sali@rockefeller.edu>
Error using MALIGN3D 2002/01/24
- From: Michael Buck <mjbuck@unity.ncsu.edu>
RE: Error using MALIGN3D 2002/01/24
- From: "Andrej Sali" <Sali@rockefeller.edu>
RE: malign3D question 2002/01/24
- From: "Andrej Sali" <Sali@rockefeller.edu>
RE: reask 2002/01/24
- From: "Andrej Sali" <Sali@rockefeller.edu>
Helix kink 2002/01/26
- From: "Dan Thomas Major" <majord@mail.biu.ac.il>
RE: Helix kink 2002/01/26
- From: "Andrej Sali" <Sali@rockefeller.edu>
memory requirements 2002/01/28
- From: Ada Prochnicka-Chalufour <ada@pasteur.fr>
sequence_search 2002/01/28
- From: marco sette <wolfarthit@yahoo.it>
library error 2002/01/28
- From: dkabic01 <dkabic01@athena.louisville.edu>
** MODELLER Support ** RE: memory requirements 2002/01/28
- From: "Bozidar Jerkovic" <bozidar@salilab.org>
** MODELLER Support ** RE: memory requirements 2002/01/28
- From: "Bozidar Jerkovic" <bozidar@salilab.org>
Re: memory requirements 2002/01/28
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: sequence_search 2002/01/28
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: library error 2002/01/28
- From: Andras Fiser <andras@viol.rockefeller.edu>
Non-bonded clashes 2002/01/29
- From: Derek Smith <derek@ysbl.york.ac.uk>
SGI:segmentation fault 2002/01/31
- From: Ada Prochnicka-Chalufour <ada@pasteur.fr>
difference between version 4 and 6 2002/01/31
- From: Luca Settimo <lsettimo@abo.fi>
RE: difference between version 4 and 6 2002/02/01
- From: Andras Fiser <andras@viol.rockefeller.edu>
protein structure file (psf)-II 2002/02/01
- From: "Nitin Rathore" <rathore@cae.wisc.edu>
protein structure file (psf)- III 2002/02/01
- From: "Nitin Rathore" <rathore@cae.wisc.edu>
Re: Protein Structure File (psf) - III 2002/02/04
- From: "Nitin Rathore" <rathore@cae.wisc.edu>
model_loop 2002/02/04
- From: Gilles Labesse <labesse@cbs.cnrs.fr>
Are You Paying Too Much For Life Insurance? KYG 2002/02/05
- From: TermQuotes@eudoramail.com
Hello sir 2002/02/08
- From: deepa thangavelu <to_jaguar@yahoo.co.in>
Re: model_loop problem 2002/02/08
- From: Andras Fiser <andras@viol.rockefeller.edu>
3D Gap penalty 2002/02/08
- From: Lei Wang <Lei.Wang@mssm.edu>
create a disulphide in a protein 2002/02/11
- From: Giulio Rastelli <giulio@caesar.unimo.it>
Re: create a disulphide in a protein 2002/02/11
- From: Roberto Sanchez <Roberto.Sanchez@mssm.edu>
** MODELLER Support ** create a disulphide in a protein 2002/02/11
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: create a disulphide in a protein 2002/02/11
- From: Roberto Sanchez <Roberto.Sanchez@mssm.edu>
** MODELLER Supposrt ** 3D Gap penalty 2002/02/11
- From: "Bozidar Jerkovic" <bozidar@salilab.org>
** MODELLER Support ** Docking with modeller ? 2002/02/12
- From: "Bozidar Jerkovic" <bozidar@salilab.org>
Modelling Heme 2002/02/13
- From: Christoph Nimptsch <christoph.nimptsch@uni-tuebingen.de>
MODELLING LOOPS 2002/02/13
- From: Obdulia Rabal <obdulia@edurne.iqs.es>
restraints on beta strands 2002/02/13
- From: Juliette Martin <jmartin@bichat.inserm.fr>
Re: Modelling Heme 2002/02/13
- From: fisera <fisera@rockefeller.edu>
Re: Modelling Heme 2002/02/13
- From: Roberto Sanchez <Roberto.Sanchez@mssm.edu>
errror in .log 2002/02/14
- From: Giulio Rastelli <giulio@caesar.unimo.it>
RE: errror in .log 2002/02/14
- From: "Andrej Sali" <sali@rockefeller.edu>
How to model DNA binding protein 2002/02/14
- From: Michael Buck <mjbuck@unity.ncsu.edu>
TRANFER_XYZ (cluster_cut>0) 2002/02/15
- From: Obdulia Rabal <obdulia@edurne.iqs.es>
strand restraints 2002/02/15
- From: Reuter Nathalie <reuter@bichat.inserm.fr>
Re: strand restraints 2002/02/15
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: TRANFER_XYZ (cluster_cut>0) 2002/02/16
- From: fisera <fisera@rockefeller.edu>
bug report 2002/02/16
- From: vuissoz Jean-Marc <vuissozjm@bluewin.ch>
Re: bug report 2002/02/16
- From: fisera <fisera@rockefeller.edu>
** MODELLER Support ** bug report 2002/02/16
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
** MODELLER Support ** IMPORTANT PLEASE READE! 2002/02/16
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
mkspline_E 2002/02/18
- From: Luca Settimo <lsettimo@abo.fi>
RE: mkspline_E 2002/02/18
- From: "Andrej Sali" <sali@rockefeller.edu>
Re: starting problem (fwd) 2002/02/18
- From: Boojala Reddy <breddy@sdsc.edu>
Re: mkspline_E 2002/02/18
- From: fisera <fisera@rockefeller.edu>
** MODELLER Support ** TEST PLEASE IGNORE 2002/02/18
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
** MODELLER SUPPORT ** TEST PLEASE IGNORE 2002/02/18
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
objetive function in Modeller and z score in Prosa 2002/02/18
- From: Violet Chang <violet@physbio.mssm.edu>
Re: objetive function in Modeller and z score in Prosa 2002/02/18
- From: fisera <fisera@rockefeller.edu>
Hai modeller people!!!!!!!! 2002/02/19
- From: R Senthil Kumar <skumar@www.cdfd.org.in>
Using NAD 2002/02/19
- From: bessiew <bessiew@mail.ukans.edu>
** MODELLER SUPPORT ** RE: Hai modeller people!!!!!!!! 2002/02/19
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
Re: Using NAD 2002/02/19
- From: fisera <fisera@rockefeller.edu>
** MODELLER SUPPORT ** RE: Hai modeller people!!!!!!!! 2002/02/19
- From: Bozidar Jerkovic <bozidar@salilab.org>
** MODELLER SUPPORT ** RE: starting problem (fwd) 2002/02/20
- From: Bozidar BJ Jerkovic <bozidar@salilab.org>
Strange Error 2002/02/22
- From: Michael Buck <mjbuck@unity.ncsu.edu>
modelling of small peptide 2002/02/25
- From: Violet Chang <violet@physbio.mssm.edu>
Hello Sir 2002/02/25
- From: deepa thangavelu <to_jaguar@yahoo.co.in>
basic question? 2002/02/26
- From: Michael Buck <mjbuck@unity.ncsu.edu>
Re: modelling of small peptide 2002/02/26
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: basic question? 2002/02/26
- From: Andras Fiser <andras@viol.rockefeller.edu>
starting modeller: what's wrong? 2002/02/27
- From: "Ari M. Siqueira" <ari_siqueira@uol.com.br>
** MODELLER Support ** RE: starting modeller: what's wrong? 2002/02/27
- From: "Bozidar" <bozidar@salilab.org>
Re: starting modeller: what's wrong? 2002/02/27
- From: Michael Buck <mjbuck@unity.ncsu.edu>
** MODELLER Support ** RE: Strange Error 2002/02/27
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
Re: modeller 2002/02/27
- From: Bozidar Jerkovic <bozidar@salilab.org>
** MODELLER Support ** Re: modeller 2002/02/27
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: ** MODELLER Support ** Re: modeller 2002/02/27
- From: Yugo Acimovic <yugo@intelligentbiosystems.com>
Silvana's question 2002/02/28
- From: margot <margot@coil.mdy.univie.ac.at>
memory failure 2002/02/28
- From: Francesco Musiani <fmusiani@agrsci.unibo.it>
Re: memory failure 2002/02/28
- From: Björn Wallner <bjorn@sbc.su.se>
** MODELLER Support ** RE: memory failure 2002/02/28
- From: "Bozidar" <bozidar@salilab.org>
multiple domains 2002/03/01
- From: Stefano Ciurli <sciurli@agrsci.unibo.it>
Problem with Sequence_Search 2002/03/01
- From: Thorsten Schweikardt <thorsten@mail.uni-mainz.de>
RE: Problem with Sequence_Search 2002/03/01
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
Fortran Runtime Error 2002/03/03
- From: "PENG" <hppeng@bioinfo.ndhu.edu.tw>
RE: Fortran Runtime Error 2002/03/03
- From: "Bozidar" <bozidar@salilab.org>
RE: Problem with Sequence_Search 2002/03/03
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
Re: Problems optimizing when BLK residues are present 2002/03/05
- From: Cláudio Soares <claudio@itqb.unl.pt>
New MODELLER 6v2 in a few weeks 2002/03/05
- From: "Bozidar" <bozidar@salilab.org>
restraints 2002/03/06
- From: margot <margot@coil.mdy.univie.ac.at>
(OTCBB : LMGR) Paves the way in the Field of Optics D 2002/03/06
- From: StockAlerts@Telkom.net
restraints 2002/03/07
- From: margot <margot@coil.mdy.univie.ac.at>
RE: restraints 2002/03/07
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
MODELLER web page problem with debbuger turned on in MS Internet Explorer 2002/03/07
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
Re: Modeller problem 2002/03/08
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: restraints 2002/03/08
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: Strange Error 2002/03/08
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: multiple domains 2002/03/08
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: Problems optimizing when BLK residues are present 2002/03/08
- From: Andras Fiser <andras@viol.rockefeller.edu>
(OTCBB : DTMI) Special Investment Alert GQGT 2002/03/15
- From: StockNews@Telkom.net
modeller for mac osX ??? 2002/03/19
- From: jacques deruchoud <glasene@yahoo.com>
problem with BLK residues using multiple templates 2002/03/19
- From: Lucy Forrest <lf@mrc-dunn.cam.ac.uk>
pdb format 2002/03/19
- From: Stephane Coillet-Matillon <coillet@bri.nrc.ca>
RE: pdb format 2002/03/19
- From: "Bozidar" <bozidar@salilab.org>
RE: pdb format 2002/03/20
- From: Stephane Coillet-Matillon <coillet@bri.nrc.ca>
RE: pdb format 2002/03/20
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
Re: RE: pdb format 2002/03/20
- From: "Eric Feyfant" <EFeyfant@wyeth.com>
SKipping models 2002/03/22
- From: Gordon Wells <gordon@tuks.co.za>
Re: modeler 2002/03/22
- From: Bozidar Jerkovic <bozidar@salilab.org>
SUPPORT Re: SKipping models 2002/03/22
- From: fisera <fisera@rockefeller.edu>
GPCR 2002/03/22
- From: Rosalia Pascual <rosalia@edurne.iqs.es>
(OTCBB: PLRP) Continues to Set Record Volumes 2002/03/27
- From: elco@8848.net
failed to allocate maxcell 2002/03/27
- From: Mateusz Nowak <mynowak@cyf-kr.edu.pl>
Inquiry - Modeller (How to begin a program?) 2002/03/29
- From: gt4578a@prism.gatech.edu
How to start 2002/03/29
- From: "Jianchao YAO" <jcyao@eee.hku.hk>
Re: How to start 2002/03/30
- From: Bozidar Jerkovic <bozidar@salilab.org>
(OTCBB: LMGR) Paves the Way in the Field of Optics 2002/04/01
- From: tsu@email.itl.net.ua
model coordinate uncertainty 2002/04/02
- From: margot <margot@coil.mdy.univie.ac.at>
Re: model coordinate uncertainty 2002/04/02
- From: Michael Buck <mjbuck@unity.ncsu.edu>
Investors in the Stock Market: QY 2002/04/02
- From: "chrislyne" <ufnbe65wm@pinn.net>
CHANGE IN A SUBSCRIPTION POLICY Re: (Fwd) Investors in the Stock Market: QY 2002/04/02
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: CHANGE IN A SUBSCRIPTION POLICY Re: (Fwd) Investors in the Stock Market: QY 2002/04/02
- From: Bozidar Jerkovic <bozidar@salilab.org>
Stock 2002/04/03
- From: Bozidar Jerkovic <bozidar@salilab.org>
List update email 2002/04/03
- From: "Bozidar" <bozidar@salilab.org>
(OTCBB: WSCH) Special Investment Update 2002/04/05
- From: traiber@ok.ru
model coordinate uncertainty 2002/04/08
- From: margot <margot@coil.mdy.univie.ac.at>
(OTCBB: WSCH) Special Investment Update 2002/04/08
- From: leeuwen@163.net
Re: MODELLER 2002/04/08
- From: Bozidar Jerkovic <bozidar@salilab.org>
[no subject] 2002/04/08
- From: Bozidar Jerkovic <bozidar@salilab.org>
[no subject] 2002/04/08
- From: Bozidar Jerkovic <bozidar@piano.rockefeller.edu>
List security update 2002/04/08
- From: Bozidar Jerkovic <bozidar@salilab.org>
problem with sequence search 2002/04/09
- From: "michael hanlon (BITS)" <michael.hanlon@bbsrc.ac.uk>
RE: problem with sequence search 2002/04/09
- From: "Bozidar" <bozidar@salilab.org>
phospo-serine residues 2002/04/10
- From: Voula Kanelis <kanelis@sauron.psf.sickkids.on.ca>
problem with template selection using compare 2002/04/10
- From: "michael hanlon (BITS)" <michael.hanlon@bbsrc.ac.uk>
How to run the tutorial-model 2002/04/11
- From: "Jianchao YAO" <jcyao@eee.hku.hk>
problem in running model script 2002/04/11
- From: giulio@unimo.it
RE: Questions 2002/04/12
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
RE: phospo-serine residues 2002/04/12
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
RE: How to do modeling with non-standard residue? 2002/04/12
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
FW: FW: MODELLER 2002/04/12
- From: "Bozidar" <bozidar@salilab.org>
Re: phospo-serine residues 2002/04/12
- From: Andras Fiser <andras@viol.rockefeller.edu>
Submission of alignments 2002/04/14
- From: "Dinesh Soares" <dineshsoares@hotmail.com>
theory info 2002/04/15
- From: Luca Settimo <lsettimo@abo.fi>
RE: Reading_PDB_File 2002/04/15
- From: "Bozidar" <bozidar@salilab.org>
Cutsom build residues, was RE: phospo-serine residues 2002/04/15
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
how to setup a nice modelling environment? 2002/04/16
- From: "Ari M. Siqueira" <siqueira@icb.ufmg.br>
Loop modeling: old vs. new 2002/04/17
- From: Mensur Dlakic <mensur@umich.edu>
modified residues (pyruvoyl) 2002/04/17
- From: Gordon <gordon@tuks.co.za>
Re: Loop modeling: old vs. new 2002/04/17
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: theory info 2002/04/17
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: Loop modeling: old vs. new 2002/04/17
- From: Andras Fiser <andras@viol.rockefeller.edu>
RE: theory info 2002/04/17
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
randomize dihedrals 2002/04/18
- From: Evers Andreas <evers@mailer.uni-marburg.de>
Adding residues 2002/04/22
- From: Dan Thomas Major <majord@mail.biu.ac.il>
RE: RE: Segmentation Fault during modelling with modeller6v1 2002/04/22
- From: "Bozidar" <bozidar@salilab.org>
[Fwd: Adding residues] 2002/04/22
- From: Dan Thomas Major <majord@mail.biu.ac.il>
RE: RE: Segmentation Fault during modelling with modeller6v1 2002/04/23
- From: "Bozidar" <bozidar@salilab.org>
Memory leak / kernel crash / missing chain_ID 2002/04/23
- From: "Bozidar Jerkovic" <bozidar@oboe.rockefeller.edu>
RE: RE: RE: Segmentation Fault during modelling with modeller6v 2002/04/24
- From: "Bozidar" <bozidar@salilab.org>
array too small error 2002/04/24
- From: Marina Gimpelev <ms1063@columbia.edu>
Re: array too small error 2002/04/24
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: Memory leak / kernel crash / missing chain_ID (fwd) 2002/04/25
- From: Bozidar Jerkovic <bozidar@salilab.org>
Re: Memory leak / kernel crash / missing chain_ID 2002/04/25
- From: Bozidar Jerkovic <bozidar@salilab.org>
MODELLER & XPLOR 2002/04/26
- From: Mensur Dlakic <mensur@umich.edu>
Re: Running MODELLER 2002/04/26
- From: Bozidar Jerkovic <bozidar@salilab.org>
starting with 6v1 2002/05/02
- From: Laurent Troxler <L.Troxler@ibmc.u-strasbg.fr>
Re: starting with 6v1 2002/05/02
- From: Bozidar Jerkovic <bozidar@salilab.org>
Bad template? 2002/05/02
- From: Lei Wang <Lei.Wang@mssm.edu>
Re: Bad template?--log ali. and top files. 2002/05/02
- From: Lei Wang <Lei.Wang@mssm.edu>
LJ potentials 2002/05/02
- From: Evers Andreas <evers@mailer.uni-marburg.de>
modeling cis-proline 2002/05/03
- From: Douglas Kojetin <djkojeti@unity.ncsu.edu>
using modeller w/ multiple CPUs 2002/05/05
- From: Douglas Kojetin <djkojeti@unity.ncsu.edu>
modeller 2002/05/06
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: modeller 2002/05/07
- From: Doug Kojetin <djkojeti@unity.ncsu.edu>
Re: modeller 2002/05/07
- From: Bozidar Yerkovich <bozidar@salilab.org>
Modeller in queue 2002/05/08
- From: Dan Thomas Major <majord@mail.biu.ac.il>
Re: Modeller in queue 2002/05/08
- From: "Roberto Sanchez" <roberto.sanchez@mssm.edu>
Re: 6v2 2002/05/10
- From: Bozidar Yerkovich <bozidar@salilab.org>
Comparing energy terms 2002/05/11
- From: Dan Thomas Major <majord@mail.biu.ac.il>
Re: Comparing energy terms 2002/05/12
- From: Andras Fiser <andras@viol.rockefeller.edu>
Modeller 4 2002/05/13
- From: "Dinesh Soares" <dineshsoares@hotmail.com>
Re: Modeller 4 2002/05/13
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
Re: Modeller 4 2002/05/13
- From: "Dinesh Soares" <dineshsoares@hotmail.com>
modeller4 2002/05/13
- From: sasson iris <sassonir@cs.bgu.ac.il>
[no subject] 2002/05/15
- From: Mensur Dlakic <mensur@umich.edu>
Topology and parameter files for sugar residues in glycoproteins 2002/05/17
- From: "Andersen, Kim Vilbour (KVA)" <kva@maxygen.dk>
Topology and parameter files for sugar residues in glycoproteins 2002/05/17
- From: Bozidar Yerkovich <bozidar@salilab.org>
Better Prosa Z-scores for models than template 2002/05/17
- From: Mensur Dlakic <mensur@umich.edu>
Re: Better Prosa Z-scores for models than template 2002/05/17
- From: "Roberto Sanchez" <roberto.sanchez@mssm.edu>
model evaluation 2002/05/19
- From: Giselle Knudsen <knudsen@cgl.ucsf.EDU>
Alignment sequence not found in PDB file 2002/05/20
- From: "Rajesh Reddy" <rajesh_ahanya@hotmail.com>
RMSD calculation 2002/05/20
- From: Douglas Kojetin <djkojeti@unity.ncsu.edu>
Re: RMSD calculation 2002/05/20
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
SYMMETRY 2002/05/21
- From: Valeria Costa <costa@sissa.it>
Re: RMSD calculation 2002/05/24
- From: Douglas Kojetin <djkojeti@unity.ncsu.edu>
Re: RMSD calculation 2002/05/24
- From: Eashwar Narayanan <eashwar@bass.rockefeller.edu>
Re: 2002/05/28
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
Hai!!! 2002/05/29
- From: R Senthil Kumar <skumar@www.cdfd.org.in>
MODELLER 6v2 available 2002/05/30
- From: Bozidar Yerkovich <bozidar@salilab.org>
Which loop energy? 2002/05/30
- From: "J Simms" <JXS818@bham.ac.uk>
MODELLER for OsX (Was: MODELLER 6v2 available) 2002/05/30
- From: Bozidar Yerkovich <bozidar@salilab.org>
re:MODELLER for OsX (Was: MODELLER 6v2 available) 2002/05/30
- From: Prevost Martine <mprevost@ulb.ac.be>
Re: Which loop energy? 2002/05/30
- From: fisera <fisera@rockefeller.edu>
Modeller for WIN 2002/06/03
- From: "Gianluca Croce" <gianluca.croce@mfn.unipmn.it>
Re: Modeller for WIN 2002/06/03
- From: Hafsa Ahsan <aahh@cyberaccess.com.pk>
Modelling multi subunit proteins 2002/06/05
- From: Norbert Straeter <strater@chemie.fu-berlin.de>
Re: Modelling multi subunit proteins 2002/06/05
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: Modelling multi subunit proteins 2002/06/05
- From: Andras Fiser <andras@viol.rockefeller.edu>
problem in modeller 2002/06/08
- From: "syed azimuddin" <iqbal_azimuddin@daak.net>
Mod 6v2 : array too small 2002/06/10
- From: Juliette Martin <jmartin@bichat.inserm.fr>
Modelling post trans mods 2002/06/11
- From: "J Simms" <JXS818@bham.ac.uk>
Re: Modelling post trans mods 2002/06/11
- From: Andras Fiser <andras@viol.rockefeller.edu>
Mol file... 2002/06/13
- From: "Bkcho" <bkcho01@yahoo.co.kr>
align problem 2002/06/14
- From: "Gianluca Croce" <gianluca.croce@mfn.unipmn.it>
array too small problem 2002/06/15
- From: Tommy Wang <chernhoe@ima.org.sg>
user_distance, group restraints 2002/06/18
- From: Karl Gruber <karl.gruber@uni-graz.at>
Ideal helices 2002/06/18
- From: Dan Thomas Major <majord@mail.biu.ac.il>
Re: Ideal helices 2002/06/18
- From: "Peter C. Lai" <sirmoo@cowbert.2y.net>
helix axis of alfa-helix 2002/06/19
- From: "Michael Petersen" <mip@chem.sdu.dk>
Error in win distribution 2002/06/20
- From: Andras Fiser <andras@viol.rockefeller.edu>
MPAIRS problem - 6.2 vs 6a 2002/06/20
- From: Daniel John Rigden <daniel@cenargen.embrapa.br>
win-modeller 2002/06/24
- From: Shamshad Zarina <szed4@yahoo.com>
Re: win-modeller 2002/06/24
- From: Mensur Dlakic <mensur@umich.edu>
Re: win-modeller 2002/06/24
- From: "Peter C. Lai" <sirmoo@cowbert.2y.net>
what is wrong? 2002/06/25
- From: "Yoram Devary" <devary@mail.jct.ac.il>
Re: what is wrong? 2002/06/25
- From: Andras Fiser <andras@viol.rockefeller.edu>
the alignment problem 2002/07/04
- From: Margot Ernst <margot.ernst@univie.ac.at>
Re: the alignment problem 2002/07/04
- From: Daniel John Rigden <daniel@cenargen.embrapa.br>
Re: the alignment problem 2002/07/04
- From: Paul@pdchem.demon.co.uk (Paul Davis)
E> Array too small. Increase MPAIRS, 6v2 executable update July 4th 2002. 2002/07/04
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
6v2 executable update July 4th 2002. 2002/07/04
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
The sequence of template was wrongly read! 2002/07/07
- From: "Kong Lesheng" <lesheng@bic.nus.edu.sg>
Some problems with respect to non-standard residues 2002/07/08
- From: "Kong Lesheng" <lesheng@bic.nus.edu.sg>
the alignment problem 2002/07/08
- From: Margot Ernst <margot.ernst@univie.ac.at>
What is de problem?? 2002/07/09
- From: "Juan Palacios" <juan.palacio@biotec.utfsm.cl>
complete set of execs for repaired 6v2 2002/07/09
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
new user 2002/07/11
- From: erase test <erase@mail.jct.ac.il>
Fwd: modeller top files 2002/07/12
- From: Bozidar Yerkovich <bozidar@piano.rockefeller.edu>
What is the problem?? 2002/07/16
- From: sasson iris <sassonir@cs.bgu.ac.il>
Re: What is the problem?? 2002/07/16
- From: fisera <fisera@rockefeller.edu>
Alignment problem 2002/07/18
- From: Frederico Moreno <pepeumoreno@yahoo.com.br>
Re: Alignment problem 2002/07/18
- From: Bozidar Yerkovich <bozidar@salilab.org>
PDB problem 2002/07/18
- From: Frederico Moreno <pepeumoreno@yahoo.com.br>
Re: PDB problem 2002/07/18
- From: Bozidar Yerkovich <bozidar@salilab.org>
main chain atoms 2002/07/18
- From: "Carlos Sosa" <c.r.sosa-aguirre@reading.ac.uk>
Re: main chain atoms 2002/07/19
- From: Andras Fiser <andras@viol.rockefeller.edu>
MAXSPL problem 2002/07/19
- From: Tommy Wang <chernhoe@ima.org.sg>
unknown residue type ERROR MESSEGE 2002/07/21
- From: sasson iris <sassonir@cs.bgu.ac.il>
Re: unknown residue type ERROR MESSEGE 2002/07/22
- From: Andras Fiser <andras@viol.rockefeller.edu>
Modelling Dimers 2002/07/25
- From: Michael Buck <mjbuck@unity.ncsu.edu>
Re: Modelling Dimers 2002/07/25
- From: Daniel John Rigden <daniel@cenargen.embrapa.br>
selecting the alignment matrix 2002/07/25
- From: Alessandro Contini <alessandro.contini@unimi.it>
Mac OS X MODELLER 6v2 is here! 2002/07/25
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Mac OS X MODELLER 6v2 is here! 2002/07/25
- From: "Peter C. Lai" <sirmoo@cowbert.2y.net>
glutamates patch 2002/07/26
- From: Valeria Costa <costa@sissa.it>
Re: Mac OS X MODELLER 6v2 is here! 2002/07/26
- From: Bozidar Yerkovich <bozidar@salilab.org>
OSF versions of 6v0 and 6v2 give illegal instruction error 2002/07/26
- From: Robert Williams <bob@bob.usuhs.mil>
MPAIRS 2002/07/26
- From: Cameron Long <peachy@aol.com>
hetero atoms 2002/07/29
- From: Cameron Long <calong@cweblog.usuhs.mil>
Re: MPAIRS 2002/07/29
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: OSF versions of 6v0 and 6v2 give illegal instruction error 2002/07/29
- From: Bozidar Yerkovich <bozidar@salilab.org>
Chains A,B,C,D 2002/07/29
- From: Frederico Moreno <pepeumoreno@yahoo.com.br>
Re: Chains A,B,C,D 2002/07/29
- From: Bozidar Yerkovich <bozidar@salilab.org>
RTF file for HYP 2002/07/30
- From: Lesheng Kong <lesheng@bic.nus.edu.sg>
How much time? 2002/07/30
- From: Shamshad Zarina <szed4@yahoo.com>
Re: How much time? 2002/07/30
- From: Mensur Dlakic <mensur@umich.edu>
Why MODERLLER6v2 cannot recognize these Variables? 2002/07/30
- From: Lesheng Kong <lesheng@bic.nus.edu.sg>
CHARMM version? 2002/07/31
- From: "Dinesh Soares" <dineshsoares@hotmail.com>
MAXRER 2002/07/31
- From: Alessandro Contini <alessandro.contini@unimi.it>
Re: How much time? 2002/07/31
- From: Shamshad Zarina <szed4@yahoo.com>
Re: How much time? 2002/07/31
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: MAXRER 2002/08/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: OSF versions of 6v0 and 6v2 give illegal instruction error 2002/08/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: CHARMM version? 2002/08/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Error message 2002/08/01
- From: Troy Wymore <wymore@psc.edu>
Re: Error message 2002/08/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Error message 2002/08/01
- From: Troy Wymore <wymore@psc.edu>
Re: Error message 2002/08/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: modeller restrain 2002/08/02
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Error message 2002/08/02
- From: Bozidar Yerkovich <bozidar@salilab.org>
modeller 2002/08/04
- From: sasson iris <sassonir@cs.bgu.ac.il>
Re: Modeller6v2 installation problem 2002/08/06
- From: Bozidar Yerkovich <bozidar@salilab.org>
MAXPL , STDEV 2002/08/11
- From: sasson iris <sassonir@cs.bgu.ac.il>
Another error 2002/08/11
- From: sasson iris <sassonir@cs.bgu.ac.il>
"Array too small. Increase MBNDPF" 2002/08/12
- From: Kong Lesheng <lesheng@bic.nus.edu.sg>
Re: MAXPL , STDEV 2002/08/12
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Another error 2002/08/12
- From: Bozidar Yerkovich <bozidar@salilab.org>
Admin update: modeller_usage digest 2002/08/12
- From: Bozidar Yerkovich <bozidar@salilab.org>
Potential 2002/08/13
- From: sasson iris <sassonir@cs.bgu.ac.il>
problems with optimaze 2002/08/13
- From: Pedro A Reche <reche@research.dfci.harvard.edu>
Re: problems with optimaze 2002/08/13
- From: Bozidar Yerkovich <bozidar@salilab.org>
adding calcium ion for modelling 2002/08/14
- From: Nyoman Kurniawan <nyomankurniawan@netscape.net>
disulfide bridges 2002/08/14
- From: Pedro A Reche <reche@research.dfci.harvard.edu>
SS bridges 2002/08/14
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Re: "Array too small. Increase MBNDPF" 2002/08/15
- From: Kong Lesheng <lesheng@bic.nus.edu.sg>
Re: Re: "Array too small. Increase MBNDPF" 2002/08/15
- From: Bozidar Yerkovich <bozidar@salilab.org>
Alignment sequence not found in PDB file 2002/08/15
- From: Karsten Suhre <Karsten.Suhre@igs.cnrs-mrs.fr>
Re: Alignment sequence not found in PDB file 2002/08/15
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Alignment sequence not found in PDB file 2002/08/16
- From: Karsten Suhre <Karsten.Suhre@igs.cnrs-mrs.fr>
Re: Alignment sequence not found in PDB file 2002/08/16
- From: Bozidar Yerkovich <bozidar@salilab.org>
point mutation modeling 2002/08/16
- From: Jonathan Esguerra <md1jonat@mdstud.chalmers.se>
Re: Alignment sequence not found in PDB file 2002/08/16
- From: Karsten Suhre <Karsten.Suhre@igs.cnrs-mrs.fr>
Re: point mutation modeling 2002/08/16
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Alignment sequence not found in PDB file 2002/08/16
- From: Bozidar Yerkovich <bozidar@salilab.org>
how are these restraints obtained? 2002/08/21
- From: "michael hanlon (BITS)" <michael.hanlon@bbsrc.ac.uk>
How to avoid funny structure in all-hydrogen modeling? 2002/08/21
- From: Lesheng Kong <lesheng@bic.nus.edu.sg>
Re: How to avoid funny structure in all-hydrogen modeling? 2002/08/21
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: how are these restraints obtained? 2002/08/21
- From: Andras Fiser <andras@viol.rockefeller.edu>
anti-hCG IgG1 structure 2002/08/23
- From: zjnjuct <zjnjuct@yahoo.com>
OPTIMIZE 2002/08/26
- From: Bozidar Yerkovich <bozidar@salilab.org>
criteria for best template....after comparison of many structures 2002/08/26
- From: gowthaman ramasamy <gowtham@icgeb.res.in>
Re: criteria for best template....after comparison of many structures 2002/08/26
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: criteria for best template....after comparison of many structures 2002/08/26
- From: Andras Fiser <andras@viol.rockefeller.edu>
scoring models against X-ray data 2002/08/27
- From: Karsten Suhre <Karsten.Suhre@igs.cnrs-mrs.fr>
Re: scoring models against X-ray data 2002/08/27
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: scoring models against X-ray data 2002/08/27
- From: Karsten Suhre <Karsten.Suhre@igs.cnrs-mrs.fr>
Re: scoring models against X-ray data 2002/08/27
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: scoring models against X-ray data 2002/08/27
- From: Andras Fiser <andras@viol.rockefeller.edu>
System crash! 2002/08/28
- From: Shamshad Zarina <szed4@yahoo.com>
System crash! 2002/08/28
- From: Shamshad Zarina <szed4@yahoo.com>
Optimize in Modeller 6v2 2002/08/28
- From: alextk@univ.kiev.ua
Re: Optimize in Modeller 6v2 2002/08/28
- From: Andras Fiser <andras@viol.rockefeller.edu>
Re: System crash! 2002/08/29
- From: Bozidar Yerkovich <bozidar@salilab.org>
2 problems - HETATM_IO and strange log (fwd) 2002/09/02
- From: Frank J A B <alarcon@lncc.br>
atom file 2002/09/02
- From: 조병관 <bkcho01@yahoo.co.kr>
Re: atom file 2002/09/02
- From: "Peter C. Lai" <sirmoo@cowbert.2y.net>
'sequence not read in' 2002/09/02
- From: 조병관 <bkcho01@yahoo.co.kr>
Re: 'sequence not read in' 2002/09/03
- From: Andras Fiser <andras@salilab.org>
Re: 'sequence not read in' 2002/09/03
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Modeller for Mac OS X 2002/09/03
- From: Bozidar Yerkovich <bozidar@salilab.org>
HETATM_IO and strange log 2002/09/03
- From: Frank J A B <alarcon@lncc.br>
# SET SELECTION_SEARCH = 'SPHERE_SEGMENT', SPHERE_RADIUS = 6 2002/09/06
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: # SET SELECTION_SEARCH = 'SPHERE_SEGMENT', SPHERE_RADIUS = 6 2002/09/06
- From: Bozidar Yerkovich <bozidar@salilab.org>
Bounced emails 2002/09/06
- From: Bozidar Yerkovich <bozidar@salilab.org>
embarassingly parallel modeller 2002/09/11
- From: "David E. Konerding" <dakone@uclink.berkeley.edu>
stuck 2002/09/15
- From: "Jory L. Zmuda" <jzmuda@vt.edu>
Re: embarassingly parallel modeller 2002/09/17
- From: Andras Fiser <andras@salilab.org>
B-factors in Modeller 2002/09/18
- From: "Dinesh Soares" <dineshsoares@hotmail.com>
Gaps in the PDB file 2002/09/18
- From: "Fabio Passetti" <fabiopassetti@hotmail.com>
Re: Gaps in the PDB file 2002/09/18
- From: "Peter C. Lai" <sirmoo@cowbert.2y.net>
use of Modeller in molecular replacement (X-ray cristallography) 2002/09/19
- From: Karsten Suhre <Karsten.Suhre@igs.cnrs-mrs.fr>
Bounced emails 2002/09/20
- From: Bozidar Yerkovich <bozidar@salilab.org>
SEQUENCE_SEARCH problems 2002/09/23
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Re: SEQUENCE_SEARCH problems 2002/09/23
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: HETATM_IO and strange log 2002/09/23
- From: Andras Fiser <andras@salilab.org>
Re: SEQUENCE_SEARCH problems 2002/09/23
- From: Mensur Dlakic <mensur@umich.edu>
RE: SEQUENCE_SEARCH problems 2002/09/23
- From: Roberto Sanchez <roberto.sanchez@mssm.edu>
Problem with SEQUENCE_SEARCH 2002/09/23
- From: "Juan Palacios" <juan.palacio@biotec.utfsm.cl>
Re: SEQUENCE_SEARCH problems 2002/09/23
- From: "David E. Konerding" <dakone@uclink.berkeley.edu>
HETATM_IO 2002/09/24
- From: Ralf Schmid <ralf@bch.ed.ac.uk>
compare problems 2002/09/24
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
RE: HETATM_IO 2002/09/24
- From: "Roberto Sanchez" <roberto.sanchez@mssm.edu>
Re: compare problems 2002/09/24
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Problem with --error --- SEQUENCE_SEARCH -- 2002/09/24
- From: "Juan Palacios" <juan.palacio@biotec.utfsm.cl>
RE: HETATM_IO 2002/09/24
- From: Jonathan Esguerra <bio_resources@yahoo.se>
/pipe1/databases/pdb/uncompressed_files/pdb1hci.ent 2002/09/24
- From: Bozidar Yerkovich <bozidar@salilab.org>
Subject: models for MR 2002/09/24
- From: Bozidar Yerkovich <bozidar@salilab.org>
Fwd: SEQUENCE_SEARCH problems 2002/09/25
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
SEQUENCE_SEARCH Question 2002/09/25
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
problem with "Sequence_search".. After executing "sequence_search" for two hours does not deliver result 2002/09/25
- From: "Juan Palacios" <juan.palacio@biotec.utfsm.cl>
Re: Problem with SEQUENCE_SEARCH 2002/09/25
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Re: SEQUENCE_SEARCH Question 2002/09/25
- From: Andras Fiser <andras@salilab.org>
align2d warnings 2002/09/26
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
TvLDH Example 2002/09/27
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Problems with modeling chimera 2002/10/01
- From: "Andersen, Kim Vilbour (KVA)" <kva@maxygen.dk>
a bug? 2002/10/01
- From: "Kong Lesheng" <lesheng@bic.nus.edu.sg>
Multiple Template Alignment Problems - MAXRES 2002/10/02
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Re: a bug? 2002/10/02
- From: Andras Fiser <andras@salilab.org>
Re: Multiple Template Alignment Problems - MAXRES 2002/10/02
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Problems with modeling chimera 2002/10/02
- From: Andras Fiser <andras@salilab.org>
Re: a bug? 2002/10/02
- From: Andras Fiser <andras@salilab.org>
Re: Multiple Template Alignment Problems - MAXRES 2002/10/03
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
ProsaII and Procheck 2002/10/03
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
RE: ProsaII and Procheck 2002/10/03
- From: Roberto Sanchez <roberto.sanchez@mssm.edu>
surface electrostatics and hydrogens 2002/10/03
- From: Douglas Kojetin <djkojeti@unity.ncsu.edu>
Re: surface electrostatics and hydrogens 2002/10/03
- From: Mensur Dlakic <mensur@umich.edu>
SS prediction 2002/10/03
- From: Santiago Ramon <sramon@ibv.csic.es>
Basic Modeling Question 2002/10/04
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
RE: Basic Modeling Question 2002/10/04
- From: "michael hanlon (BITS)" <michael.hanlon@bbsrc.ac.uk>
Re: Multiple Template Alignment Problems - MAXRES 2002/10/04
- From: Bozidar Yerkovich <bozidar@salilab.org>
No log file in Windows 2000 2002/10/07
- From: John Penniston <penniston.john@mayo.edu>
new user and domain movements 2002/10/08
- From: Jenny.Carmichael@csiro.au
Windows 2002/10/09
- From: John Penniston <penniston.john@mayo.edu>
Re: new user and domain movements 2002/10/09
- From: Andras Fiser <andras@salilab.org>
Renumbering residues 2002/10/10
- From: Jonathan Esguerra <bio_resources@yahoo.se>
Atom index out of range 2002/10/11
- From: Satyan Sharma <satyan@sun3.oulu.fi>
PDB format problem... 2002/10/12
- From: 유아림 <aryoo@prosys.korea.ac.kr>
[no subject] 2002/10/13
- From: Santiago Ramon <sramon@ibv.csic.es>
problem with SET MD_LEVEL 2002/10/14
- From: Frank J A B <alarcon@lncc.br>
Re: problem with SET MD_LEVEL 2002/10/14
- From: Bozidar Yerkovich <bozidar@salilab.org>
problem with SET MD_LEVEL 2002/10/14
- From: Frank J A B <alarcon@lncc.br>
Re: problem with SET MD_LEVEL 2002/10/15
- From: Andras Fiser <andras@salilab.org>
Usage 2002/10/15
- From: "Lewis, John" <JLewis@danforthcenter.org>
Problems reading in pdb template file 2002/10/16
- From: Ralph Elison <salmiakkigene@yahoo.com>
modeller usage 2002/10/17
- From: "Somanadh Babu" <somanadh@msitprogram.net>
Re: modeller usage 2002/10/17
- From: sasson iris <sassonir@cs.bgu.ac.il>
Question on 1fdx example 2002/10/17
- From: Richard Friedman <friedman@cancercenter.columbia.edu>
Problem to modeller 2002/10/17
- From: Juan Palacios <juan.palacio@biotec.utfsm.cl>
RE: Problem to modeller 2002/10/17
- From: "Roberto Sanchez" <roberto.sanchez@mssm.edu>
Re: Question on 1fdx example 2002/10/18
- From: Andras Fiser <andras@salilab.org>
Re: Problem to modeller 2002/10/18
- From: sasson iris <sassonir@cs.bgu.ac.il>
Bug reported in previous message - Description and Workaround 2002/10/21
- From: Richard Friedman <friedman@cancercenter.columbia.edu>
Is this a bug? 2002/10/21
- From: Richard Friedman <friedman@cancercenter.columbia.edu>
Installation problems Windows XP 2002/10/21
- From: Simon P Gough <gough@biobase.dk>
Re: Installation problems Windows XP 2002/10/21
- From: Mensur Dlakic <mensur@umich.edu>
Redhat 8.0 Error 2002/10/22
- From: "Bradley J. S. C. Olson" <olsonbr2@msu.edu>
Re: Redhat 8.0 Error 2002/10/22
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Redhat 8.0 Error 2002/10/22
- From: "Raghurama P. Hegde" <rph@physics.iisc.ernet.in>
modeller 2002/10/22
- From: somanadh <somanadh@msitprogram.net>
Re: modeller 2002/10/23
- From: sasson iris <sassonir@cs.bgu.ac.il>
Fwd: 2002/10/23
- From: Santiago Ramon <sramon@ibv.csic.es>
Re: Redhat 8.0 Error 2002/10/23
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: MODELLER (Win XP) 2002/10/23
- From: Bozidar Yerkovich <bozidar@salilab.org>
RE: Redhat 8.0 Error 2002/10/23
- From: "Bradley J. S. C. Olson" <olsonbr2@msu.edu>
Re: MODELLER (Win XP) OK 2002/10/24
- From: Simon P Gough <gough@biobase.dk>
Re: <no subject> 2002/10/25
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: Problem in MODELLER6v2 installation 2002/10/25
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: <no subject> 2002/10/25
- From: Bozidar Yerkovich <bozidar@salilab.org>
modeller installation on XP 2002/10/25
- From: "g e" <labrat2@nandomail.com>
Any Modeller Users in Chicago? 2002/10/25
- From: "g e" <labrat2@nandomail.com>
Lets Get Together 2002/10/25
- From: "Lewis, John" <JLewis@danforthcenter.org>
Re: /etc/profile instead ~/.bashrc for linux 2002/10/25
- From: Bozidar Yerkovich <bozidar@salilab.org>
Modelling domains 2002/10/29
- From: Satyan Sharma <satyan@sun3.oulu.fi>
Re: Lets Get Together 2002/10/29
- From: Courtney Olmsted <olmsted@cem.msu.edu>
[no subject] 2002/10/29
- From: "Andrej Sali" <sali@rockefeller.edu>
Re: Modelling domains 2002/10/29
- From: Andras Fiser <andras@salilab.org>
Re: FW: Query 2002/10/29
- From: Andras Fiser <andras@salilab.org>
Re: FW: Query 2002/10/30
- From: owner-modeller_usage@salilab.org
Putting in a heteroatom 2002/10/31
- From: John Penniston <penniston.john@mayo.edu>
Re: Usage 2002/11/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: problems 2002/11/01
- From: Bozidar Yerkovich <bozidar@salilab.org>
Loop Modeling 2002/11/06
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Re: Loop Modeling 2002/11/06
- From: Andras Fiser <andras@salilab.org>
Re: Loop Modeling 2002/11/07
- From: Alex Brown <abrown@nimr.mrc.ac.uk>
Re: Loop Modeling 2002/11/07
- From: Andras Fiser <andras@salilab.org>
error: Structure not read in 2002/11/09
- From: "Dr. Dan White" <dan@chalkie.org.uk>
Heteratom problems, message 1 2002/11/09
- From: John Penniston <penniston.john@mayo.edu>
Heteroatom problem, message 2 2002/11/09
- From: John Penniston <penniston.john@mayo.edu>
Re: Heteratom problems, message 1 2002/11/09
- From: Bozidar Yerkovich <bozidar@salilab.org>
Re: error: Structure not read in 2002/11/10
- From: "Raghurama P. Hegde" <rph@physics.iisc.ernet.in>
Re: error: Structure not read in 2002/11/11
- From: "Dr. Dan White" <dan@chalkie.org.uk>
electrostatic potential 2002/11/12
- From: "Yang Xiaolin" <sherin@sina.com>
tetrameric protein 2002/11/13
- From: "bharat adkar" <bharat@fastmail.ca>
Heteroatom problem solved 2002/11/13
- From: "John T. Penniston" <penniston.john@mayo.edu>
postdocs 2002/11/14
- From: Andras Fiser <andras@salilab.org>
Adding ligands to my MODEL 2002/11/15
- From: Troy Wymore <wymore@psc.edu>
Bump checking with modeller 2002/11/27
- From: Frank J A B <alarcon@lncc.br>
restraining sec. structure elements 2002/11/29
- From: Frank J A B <alarcon@lncc.br>
Re: restraining sec. structure elements 2002/12/04
- From: Bozidar Yerkovich <bozidar@salilab.org>
low sequence identity 2002/12/05
- From: Margot Ernst <margot.ernst@univie.ac.at>
RE: low sequence identity 2002/12/05
- From: "Roberto Sanchez" <roberto.sanchez@mssm.edu>
alignment help needed 2002/12/11
- From: HIDDEN
leaving gaps in non aligned regions 2002/12/12
- From: Gowthaman R <gowtham@icgeb.res.in>
RE: leaving gaps in non aligned regions 2002/12/12
- From: Roberto Sanchez <roberto.sanchez@mssm.edu>
RE: leaving gaps in non aligned regions 2002/12/12
- From: Gowthaman R <gowtham@icgeb.res.in>
floating invalid 2002/12/16
- From: Marcos Bonfadini <bonfa@if.sc.usp.br>
error 648 with modeller 2002/12/17
- From: Cédric Bauvois <cbauvois@student.ulg.ac.be>
Re: error 648 with modeller 2002/12/17
- From: Bozidar Yerkovich <bozidar@salilab.org>
assign force field 2002/12/25
- From: "Yang Xiaolin" <sherin@sina.com>

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