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atom file

Hi modellers..
When i run modeller6v1, i met 'sequence not read in' message in .log file...
There are not any problems in .ali file....
If the known sequence residue number is different with its residue number in PDB file, how can i edit the PDB file ?
.ali file
.pdb file
M 5
F 6
M 10
Byung-Kwan Cho