On Tue, Sep 03, 2002 at 01:29:23PM +0900, ?????? wrote:
> Hi modellers..
>
> When i run modeller6v1, i met 'sequence not read in' message in .log file...
> There are not any problems in .ali file....
> If the known sequence residue number is different with its residue number in PDB file, how can i edit the PDB file ?
>
> e.g.
>
> .ali file
> MFMKF......
>
> .pdb file
> M 5
> F 6
> M 10
> ......
>
> Regard..
>
> Byung-Kwan Cho
>
Sounds like you need to insert gaps into your .ali where there are
missing residues in your .pdb (You'll need to remove residues 6-10 from
your .ali file).
--
Peter C. Lai
University of Connecticut
Dept. of Molecular and Cell Biology | Undergraduate Research Assistant
Yale University School of Medicine
Center for Medical Informatics | Research Assistant
http://cowbert.2y.net/