----- Original Message -----
Sent: Friday, July 25, 2003 10:50
AM
Subject: Re: upper residue number
modeling limit?
Hi all, I need add a library file for a
non-canonical amino acid, but right now I don't have access to quanta.
The bonds/angles/impropers I can add by hand but I was wondering if anyone
knew of any easy way to generate internal coordinates? Or an alternative route
to creating a charm library file.
Cheers and Thanks,
Eli Spencer
----- Original Message -----
Sent: Friday, July 25, 2003 8:31
AM
Subject: Re: upper residue number
modeling limit?
I've used it to model a protein of 1200 residues; it just
takes longer.
John P.
Timothy Minh wrote:
Hello Modeller users,
I was
wondering if there was a limit in the amount of residues that MODELLER 6v2
can take. I have been able to model proteins approx 250
in length, but I've not been able to model larger proteins of approx 1300
residues. I would appreciate any suggestions/comments
that you may have.
Thank you!
Tim Minh
--
John T. Penniston, Ph.D.
Dept. of Biochemistry and Molecular Biology
Guggenheim 16, Mayo Clinic
200 First St. SW
Rochester, MN 55905 USA