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[modeller_usage] divide__213E> Division by zero, during seq. search
Dear modeller users.
I'm currently blocked by an unusual problem. Running modeller
for sequence search, it ends with a Divide__213E> Division by zero,
error. I don't have a clue of whats wrong or where to start
bugtracking. Hope that somebody can help me.
Esben
My NR2BS1S2.ali
P1;NR2BS1S2
sequence:NR2BS1S2:::::::0.00: 0.00
qeddhlsiVtleeapfvivesvdplsgtcmrntvpcqkrivtenktdeepgyikkcckgf
cidilkkisksvkftydlylvtngkhgkkingtwngmigevvmkraymavgsltineers
evvdfsvpfietgisvmvskgtqvsglsdkkfqrpndfsppfrfgtvpngsternirnny
aemhaymgkfnqrgvddallslktgkldafiydaavlnymagrdegcklvtigsgkvfas
tgygiaiqkdsgwkrqvdlailqlfgdgemeelealwltgichne*
My seq_search.top
#Modeller file
SET SEARCH_RANDOMIZATIONS = 100
SEQUENCE_SEARCH FILE = 'NR2BS1S2.ali', ALIGN_CODES = 'NR2BS1S2',
DATA_FILE = on
last 55 lines of seq_search.log (7392993 bytes)
seqsearc_> 3781 NR2BS1 1khhA 285 193 1 0.35 0.52
1718.00
_aln.pos 10 20 30 40 50 60
NR2BS1S2 --------------------qeddhlsiV-
tleeapfvivesvdplsgtcmrntvpcqkrivtenktd
1khhA RWETPYMHSLAAAAASRGGR--------
VL--------------------------------------
_consrvd *
_aln.p 70 80 90 100 110 120
130
NR2BS1S2
eepgyikkcckgfcidilkkisksvkftydlylvtngkhgkkingtwngmigevvmkraymavgslti
1khhA
--------------------------------------------------------------------
_consrvd
_aln.pos 140 150 160 170 180 190
200
NR2BS1S2
neersevvdfsvpfietgisvmvskgtqvsglsdkkfqrpndfs------------------------
1khhA --------------------------------------------
EVGFGMAIAASRVQQAPIKEHWII
_consrvd
_aln.pos 210 220 230 240 250 260
270
NR2BS1S2
--------------------------------------------------------------------
1khhA
ECNDGVFQRLQNWALKQPHKVVPLKGLWEEVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKTHAF
_consrvd
_aln.pos 280 290 300 310 320 330
340
NR2BS1S2
--------------------------------------------------------------------
1khhA
RLLKPGGILTYCNLTSWGELMKSKYTDITAMFEETQVPALLEAGFQRENICTEVMALVPPADCRYYAF
_consrvd
_aln.pos 350 360 370 380 390 400
NR2BS1S2 -----------
ppfrfgtvpngsternirnnyaemhaymgkfnqrgvddallslktgkldafiydaav
1khhA
PQMITPLVTKH---------------------------------------------------------
_consrvd
_aln.p 410 420 430 440 450 460
470
NR2BS1S2
lnymagrdegcklvtigsgkvfastgygiaiqkdsgwkrqvdlailqlfgdgemeelealwltgichn
1khhA
--------------------------------------------------------------------
_consrvd
_aln.pos
NR2BS1S2 e
1khhA -
_consrvd
divide__213E> Division by zero; divisor = 0.0000
recover____E> ERROR_STATUS >= STOP_ON_ERROR: 1 1
Dynamically allocated memory at finish [B,kB,MB]: 110299725
107714.578 105.190
Starting time : 2004/02/10
08:58:58.125
Closing time : 2004/02/10
09:11:00.162
Total CPU time [seconds] : 722.10