On Mon, Mar 15, 2004 at 04:10:58PM +0900, Han Choe wrote:
> How do I denote pyroglutamate as one letter in the alignment file? I
> tried small "p" but it did not work. In three letter, I use "PCA".
That's correct, but there are no parameters defined for PCA, which is
probably what's causing your problem. You will have to add suitable
parameters yourself - see http://salilab.org/modeller/FAQ.html#17
Ben Webb, Modeller Caretaker
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