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[modeller_usage] Re: modeller_usage Digest, Vol 3, Issue 51



hi

this is the error file

 

nce:query:1 : :165: :unknown
              Actual fields, should be:        7       10
              (Fields are separated by a colon, :)

Dynamically allocated memory at         amaxbnd [B,kB,MB]:      4967329    4850.
907     4.737
openf5__224_> Open       11  OLD  SEQUENTIAL  alignmentfile.ali
rdpir___376W> Not enough fields in the second line of the sequence entry:  seque
nce:query:1 : :165: :unknown
              Actual fields, should be:        7       10
              (Fields are separated by a colon, :)
read_al_375E> Unknown residue type,position,sequence:          1        1
recover____E> ERROR_STATUS >= STOP_ON_ERROR:        1       1

Dynamically allocated memory at          finish [B,kB,MB]:      4967329    4850.
907     4.737
Starting time                                            : 2004/05/03  18:32:30.
510
Closing time                                             : 2004/05/03  18:32:37.
150
Total CPU time [seconds]                                 :       6.97

C:\mod6v2\bin>

C:\mod6v2\bin>
and the alignment file is

>P1;1hm9
structureX:1hm9:2 : :183: :glmu
SNFAIILAAGKGTRMKSDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHKAELVEEVLAGQTE
-FVTQSEQLGTG-HAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD
NPF-GYGRIVRND--NAEVLRIVEQKDATDFEKQIKEINTGT-YVFDNERLFEA*
>P1;query
sequence:query:1 : :165: :unknown
SLKVIILAGGRGKRIT--LFKPFLVVCGKPLISWAFDAVNKL-SDKVYTVVGHKAELVEEVLAGQTE
IFPTPDISYENDVKYVV------ESLGPPILVLPVDIAFINNNIINNLIERCA--------VDMCTL
KSYGSYLGVTYWTGLNFSNYTDIEVK-----EKL-YNINTWEDYIKANKECNIL*

plz reply

 

 

 

 

 

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