Dear Modeller users,
I am looking for a simple MODELLER top-script that allows to remodel an
already existing loop of a protein while leaving the rest of the molecule
unchanged, that is, the input would be a single PDB file and a residue range.
The idea is to generate a number of different conformations of that loop and
to evaluate them against X-ray crystallographic data (I am trying to model a
loop that is only barely visible in a low resolution dataset).
Thank you very much in advance,
Kind regards,
Karsten Suhre, IGS-CNRS, Marseille, France.