[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

[modeller_usage] Disulfide bonds in dimer



dear my modellers!
I have a script question for you:
I want tom model dimer from homopentamer, how is correctly define disulfide bonds
like this
CALL ROUTINE = 'model'              # do homology modelling
STOP
SUBROUTINE ROUTINE = 'special_patches'
PATCH RESIDUE_TYPE = 'DISU', RESIDUE_IDS = '166' '180'
RETURN
SUBROUTINE ROUTINE = 'special_patches'
PATCH RESIDUE_TYPE = 'DISU', RESIDUE_IDS = '160' '174'
RETURN
END_SUBROUTINE

or I need to define smthing like this
RESIDUE_IDS = 'A:166' 'A:180'
RESIDUE_IDS = 'B:160' 'B:174'

Yoz Vladimir
Thanks in advance


begin:vcard
fn:Vladimir Chupakhin
n:Chupakhin;Vladimir
adr:;;;;;;Russia
email;internet:
title:PhD student
tel;work:8-095-939-35-57
tel;cell:8-905-550-55-20
x-mozilla-html:TRUE
version:2.1
end:vcard

No virus found in this outgoing message.
Checked by AVG Anti-Virus.
Version: 7.0.300 / Virus Database: 265.6.11 - Release Date: 1/12/2005