Subject: [modeller_usage] Modelling Hydrogen bond in helix
From: Panapat Uawithya <>
Date: Sun, 17 Apr 2005 19:54:07 -0700 (PDT)
Comment: DomainKeys? See http://antispam.yahoo.com/domainkeys
Hi,
I have generate a model. However the hydrogen bond
distances in the helices are shorter than normal value
eg. 2.5-2.9 Angstrom. The hydrogen bond of the
template are in normal range 2.9-3.5 Angstrom. How can
I correct this proble? I have tried energy minimaztion
but distance come a little bit shorter.
Panapat
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