But is modeller who is generating this file adsl.B99990001.pdb. I
couldnt find any parameter to set this file name.
I just need three files: the script file (mod.py), the align file (
align.ali) and the template structure (1c3c.pdb)
The PDB named adsl.B99990001.pdb that modeller cant find is a pdb file
generated by it own. as far as I know, modeller generates the models
using first the sequence name a putting after it the code B99990001.pdb
for the first structure, B99990002.pdb to the second and so on.
Modeller generates initials files, but not this one that he couldnt find.