I'm using modeller to model in two or three steps my system.
I'm first modelling conserved residues (10 models), and then use the best model
(from modeller's objective function) to produce the loops.
>From this first to the second step, i'm using a script, but i was figuring if
there was a built-in function to do this automatically (so i could merge the
two steps into one script). I would think of best_model.py or something like
this, but i'm not sure if this exists (i think i saw something like this once
but i've not been able to find it again).
Thanks a lot for yours answers,
Stéphane Teletchéa, PhD.