Subject: Re: [modeller_usage] doubt on selecting condition
From:
Date: Wed, 18 Jul 2012 14:18:08 +0530 (IST)
Respected sir
could you please clarify my doubt that what based we have to select these
four structure's(2mdh:A,2mdh:B.1b8p:A,1dbm:A) for given example of advance
modelling in modeller tutorial
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templates
The structure of the Malate Dehydrogenase 1bdm has been clustered in the
DBAli database within the family fm00495 of 4 members (2mdh:A, 2mdh:B.
1b8p:Aand 1dbm:A). The multiple alignment generated by the command
salign() in MODELLER is used in DBAli to generate a multiple structure
alignment of the family. The alignment can be downloaded from the DBAli
database or you can use the file `salign.py' to calculate it on your
computer.
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