[modeller_usage] questions about multichains modeller

Dear colleagues,

I have a problem in multichain modeller. according the template file in automodel folder, I created the input file and script file. however when I　run this script, I recieved warnings listed below. Who knows how to reslove the problem? Thanks a lot!

You can find many useful example scripts in the

examples\automodel directory.

It is recommended that you use Python to run

Modeller scripts. However, if you don't have Python installed,

you can type 'mod9.12' to run them instead.

d:\Program Files (x86)\Modeller9.12>

d:\Program Files (x86)\Modeller9.12>cd examples

d:\Program Files (x86)\Modeller9.12\examples>cd automodel

d:\Program Files (x86)\Modeller9.12\examples\automodel>python model-multichain-d

ec1.py > model-multichain-dec1.log

Traceback (most recent call last):

File "model-multichain-dec1.py", line 37, in <module>

a.make() # do homology modeling

File "d:\Program Files (x86)\Modeller9.12\modlib\modeller\automodel\automodel.

py", line 96, in make

self.homcsr(exit_stage)

File "d:\Program Files (x86)\Modeller9.12\modlib\modeller\automodel\automodel.

py", line 410, in homcsr

aln = self.read_alignment()

File "d:\Program Files (x86)\Modeller9.12\modlib\modeller\automodel\automodel.

py", line 400, in read_alignment

aln.append(file=self.alnfile, align_codes=self.knowns+[self.sequence])

File "d:\Program Files (x86)\Modeller9.12\modlib\modeller\alignment.py", line

78, in append

allow_alternates)

_modeller.ModellerError: read_al_373E> Protein specified in ALIGN_CODES(i) was n

ot found in the alignment file; ALIGN_CODES( 1) = 4h10

d:\Program Files (x86)\Modeller9.12\examples\automodel>