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Re: [modeller_usage] energy of interface between selections

On 10/28/16 9:33 AM, deepak kumar wrote:

However, does not
mentioning the "start" and "end" residue of the PDB file influence the
quality of the structure? or influence the model any way?


No.


Am I right, if I say, that modeller by default takes the residues of
chain "B", finds the corresponding residues in chain B and correctly
models the sequence as per the alignment.


That's correct.

	Ben Webb, Modeller Caretaker
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             https://salilab.org/modeller/
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